jyyulab / redeconvLinks
☆19Updated 6 months ago
Alternatives and similar repositories for redeconv
Users that are interested in redeconv are comparing it to the libraries listed below
Sorting:
- Single-Cell Inference of Class Switch Recombination☆19Updated last month
- cell type deconvolution for multi-condition bulk RNA-seq data☆28Updated 3 years ago
- ☆28Updated last month
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆27Updated 4 years ago
- Code used to process the data of the HBCA project☆32Updated last year
- ☆58Updated last year
- single-cell Contamination Detection and Correction☆14Updated 9 months ago
- A High Effect Marker Gene Search Tool for Single-cell RNA-seq Analysis☆32Updated last year
- ☆15Updated 7 months ago
- R package IReNA☆28Updated 11 months ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆34Updated 10 months ago
- Aligning gene expression trajectories of single-cell reference and query systems☆76Updated 2 months ago
- ☆21Updated 7 months ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆23Updated last year
- ☆31Updated 3 months ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated 10 months ago
- Collection of scripts for analysis of pan fetal immune atlas☆28Updated 3 years ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆20Updated last year
- ☆40Updated 2 years ago
- Computational pipeline to process EasySci-RNA data.☆21Updated last year
- ☆39Updated last month
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 11 months ago
- ☆57Updated last month
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆16Updated 2 years ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated last year
- ☆20Updated 3 months ago
- Clonalscope is a subclone detection method based on copy number alterations (CNAs) for single-cell and ST tumor sequencing data. Clonalsc…☆23Updated 2 weeks ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆43Updated 2 years ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆31Updated 3 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆38Updated 4 years ago