lydiaMyr / ImmuCellAI
ImmuCellAI (Immune Cell Abundance Identifier) is a tool to estimate the abundance of 24 immune cells from gene expression dataset including RNA-Seq and microarray data
☆14Updated last year
Alternatives and similar repositories for ImmuCellAI:
Users that are interested in ImmuCellAI are comparing it to the libraries listed below
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆29Updated 6 months ago
- Pseudotime Analysis for Bulk Data☆14Updated 5 months ago
- The source code of web server TIP, including example data.☆18Updated 5 years ago
- ☆29Updated 6 years ago
- Enrichment Networks for Pathway Enrichment Analysis☆41Updated last year
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".☆19Updated 5 years ago
- ☆9Updated 4 months ago
- ☆16Updated 2 years ago
- ☆52Updated 6 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 2 months ago
- ☆16Updated 2 years ago
- ☆54Updated last year
- R package☆21Updated last year
- A database of useful gene signatures for single-cell analysis☆20Updated 9 months ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆31Updated 3 years ago
- Calculating Tumor microenvironment score☆28Updated last year
- ☆15Updated 3 years ago
- A tool for large scale omics datasets evaluation☆24Updated last year
- Access and Format Single-cell RNA-seq Datasets from Public Resources☆34Updated 3 weeks ago
- Human brain, >200,000 nuclei☆24Updated 3 years ago
- ☆30Updated 2 years ago
- ☆45Updated 11 months ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆42Updated 11 months ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆39Updated 10 months ago
- ☆20Updated 2 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆22Updated 2 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆26Updated 6 months ago
- ☆20Updated 3 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆29Updated last month
- A pipeline for scRNA-seq data analysis☆12Updated last year