Nature machine intelligence-Stable Cox Regression for Survival Analysis under Distribution Shifts
☆23Apr 9, 2025Updated 11 months ago
Alternatives and similar repositories for StableCox
Users that are interested in StableCox are comparing it to the libraries listed below
Sorting:
- code for data processing and visualisation associated with the stromal subclasses manuscript☆13Oct 30, 2020Updated 5 years ago
- Singularity port of HLA typing based on an input exome BAM file and is currently infers infers alleles for the three major MHC class I (…☆14Jan 15, 2017Updated 9 years ago
- ☆19Oct 23, 2023Updated 2 years ago
- Official repo for AAAI 2023 paper "Stable Learning via Sparse Variable Independence".☆13Jun 6, 2024Updated last year
- CALDER (Cancer Analysis of Longitudinal Data through Evolutionary Reconstruction) reconstructs evolutionary trees from longitudinal bulk …☆15Nov 28, 2023Updated 2 years ago
- code and data for Liu, Schilling, et al Nat Med 2019☆17Aug 1, 2024Updated last year
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆22Nov 16, 2020Updated 5 years ago
- Modular pipeline for integrated analysis of the tumour microenvironment using multiplex imaging☆14Jul 29, 2025Updated 7 months ago
- The most comprehensive Python package for evaluating survival analysis models.☆50Feb 21, 2026Updated last month
- a deep learning-based retention time alignment tool for large cohort LC-MS data analysis☆15Dec 6, 2023Updated 2 years ago
- ☆20Apr 7, 2025Updated 11 months ago
- ☆14Jan 7, 2026Updated 2 months ago
- The code is soon coming.☆18Jul 24, 2025Updated 7 months ago
- Calculating Tumor microenvironment score☆29Jan 20, 2023Updated 3 years ago
- R functions underlying OmicsNet☆20Feb 10, 2026Updated last month
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆20Apr 10, 2025Updated 11 months ago
- Dual-attention Enhanced Spatial Transcriptomics Denoiser☆12May 8, 2025Updated 10 months ago
- Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers☆21Oct 12, 2022Updated 3 years ago
- ☆23Mar 12, 2026Updated last week
- ☆33Feb 26, 2025Updated last year
- analysis script for GBM single cell RNA seq data☆22May 26, 2021Updated 4 years ago
- ☆24Mar 3, 2026Updated 2 weeks ago
- Morphology-Enhanced Spatial Transcriptome Analysis Integrator☆27Mar 16, 2025Updated last year
- ☆32Jan 26, 2022Updated 4 years ago
- Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".☆132Sep 6, 2024Updated last year
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆44Dec 16, 2024Updated last year
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆55Jan 6, 2025Updated last year
- ESICCC: A systematic computational framework for evaluation, selection and integration of cell-cell communication inference methods☆13Jan 10, 2024Updated 2 years ago
- ☆27Jun 4, 2023Updated 2 years ago
- Framework for numerical computations, data analysis and visualisation☆26Mar 12, 2026Updated last week
- ☆37Sep 20, 2022Updated 3 years ago
- Breast Cancer Single Cell Atlas☆12Mar 31, 2022Updated 3 years ago
- My Self-Study Room: keep tidy and lightweight☆30Apr 25, 2024Updated last year
- Unified access to several second-generation deconvolution methods☆95Jan 5, 2026Updated 2 months ago
- Standardized benchmark for computational pathology foundation models.☆134Nov 7, 2025Updated 4 months ago
- Enhancer Linking by Methylation/Expression Relationship (ELMER) is package to identify tumor-specific changes in DNA methylation within d…☆25Feb 4, 2026Updated last month
- End-to-end pipeline to go from raw H&E slides to normalised extracted features for training☆27Mar 20, 2024Updated 2 years ago
- SurvSHAP(t): Time-dependent explanations of machine learning survival models☆97Jan 4, 2024Updated 2 years ago
- ☆10Apr 5, 2024Updated last year