Deconvolution of spatial transcriptomics at single-cell resolution
☆20Sep 19, 2024Updated last year
Alternatives and similar repositories for Redeconve
Users that are interested in Redeconve are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R and MATLAB scripts for MAGICAL☆11Jun 26, 2024Updated last year
- ☆13Jan 24, 2024Updated 2 years ago
- A High Effect Marker Gene Search Tool for Single-cell RNA-seq Analysis☆34Sep 14, 2024Updated last year
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆54Jan 21, 2026Updated 2 months ago
- ☆35Jan 23, 2024Updated 2 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Unsupervised Inference of Developmental Directions for Single Cells☆23Jan 12, 2024Updated 2 years ago
- Single Cell Oriented Reconstruction of PANDA-based Individually Optimized Networks☆27Mar 13, 2026Updated 2 weeks ago
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆14Nov 9, 2023Updated 2 years ago
- ☆33Feb 26, 2025Updated last year
- Implementation of MaSigPro for scRNA-Seq Data☆19Jul 31, 2024Updated last year
- Learning meaningful representations of genes☆21Jul 7, 2025Updated 8 months ago
- R tools for analysis and visualization of single-cell subclustering data☆18Sep 9, 2025Updated 6 months ago
- A record of the analysis pipelines used to create the HTAPP data☆34Apr 15, 2025Updated 11 months ago
- ☆13Jun 18, 2018Updated 7 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- ☆19Feb 23, 2022Updated 4 years ago
- ☆20Apr 7, 2025Updated 11 months ago
- A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gen…☆66Oct 16, 2025Updated 5 months ago
- ☆22Mar 6, 2023Updated 3 years ago
- ☆23Jul 9, 2025Updated 8 months ago
- scAB detects multiresolution cell states with clinical significance☆22Nov 14, 2022Updated 3 years ago
- causal TWAS (cTWAS)☆47Mar 18, 2026Updated last week
- ☆13Dec 15, 2021Updated 4 years ago
- Associated code to the manuscript "Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using h…☆112Jun 9, 2025Updated 9 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- A modular, containerized pipeline for PRO-seq data processing☆11Mar 6, 2026Updated 3 weeks ago
- Construct Tumor Transition Zone Microenvironment☆56Jun 25, 2025Updated 9 months ago
- ☆23Mar 12, 2026Updated 2 weeks ago
- Pan-Cancer Single Cell Classifier☆85May 30, 2024Updated last year
- Use hodge decomposition for trajectory analysis☆23Nov 12, 2025Updated 4 months ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆117Apr 26, 2025Updated 11 months ago
- CellNeighborEX: Deciphering Neighbor-Dependent Gene Expression from Spatial Transcriptomics Data☆16Mar 13, 2026Updated 2 weeks ago
- ☆46May 4, 2024Updated last year
- Supplementary information for "Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcript…☆11Jan 15, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Cell marker identification and evaluation pipeline in single cell transcriptomes.☆10Jan 9, 2025Updated last year
- Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…☆50Oct 22, 2021Updated 4 years ago
- ☆63Aug 26, 2025Updated 7 months ago
- A Toolbox for Spatial Transcriptomics Analysis☆166May 6, 2025Updated 10 months ago
- ExplaineR is an R package built for enhanced interpretation of classification and regression models based on SHAP method and interactive …☆21Aug 17, 2025Updated 7 months ago
- A database of useful gene signatures for single-cell analysis☆28May 19, 2025Updated 10 months ago
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆28Sep 6, 2024Updated last year