ZxZhou4150 / RedeconveLinks
Deconvolution of spatial transcriptomics at single-cell resolution
☆18Updated 10 months ago
Alternatives and similar repositories for Redeconve
Users that are interested in Redeconve are comparing it to the libraries listed below
Sorting:
- A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types☆11Updated 5 months ago
- ☆9Updated last year
- ☆22Updated 2 years ago
- ☆18Updated 5 months ago
- ☆20Updated last year
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆28Updated last year
- Lung cancer 10X analysis☆11Updated 4 years ago
- ☆13Updated 9 months ago
- ☆16Updated 4 years ago
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆13Updated last year
- Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer☆14Updated 8 months ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆27Updated 3 years ago
- Spatial transcriptomics of heart tissue☆22Updated 3 years ago
- ☆17Updated last year
- single-cell Contamination Detection and Correction☆12Updated 6 months ago
- ☆21Updated last year
- ☆21Updated 7 months ago
- ☆16Updated last year
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Updated 5 months ago
- Identifying external communication signals using single-cell transcriptomics data☆20Updated last year
- Code used to process the data of the HBCA project☆30Updated last year
- R package for generalized binary covariance decomposition.☆10Updated 3 weeks ago
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆16Updated 2 years ago
- ☆37Updated 2 years ago
- Unsupervised Inference of Developmental Directions for Single Cells☆22Updated last year
- Code for the spatial transcriptomic paper on IPF lungs☆19Updated last year
- Hierarchical Cell Annotation☆23Updated 8 months ago
- ☆12Updated last year
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆31Updated 2 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆32Updated 8 months ago