Alternatives and similar repositories for Redeconve

Users that are interested in Redeconve are comparing it to the libraries listed below

• BKI-immuno-KNS / MANAscore
  A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types
  ☆11Updated 10 months ago
• PaulingLiu / metaICB
  ☆22Updated 2 years ago
• wuaipinglab / scImmuCC
  Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.
  ☆10Updated last year
• XZouProjects / scCODE
  The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data
  ☆14Updated 2 years ago
• Famingzhao / NEPAL_RawCode
  NEPAL is to calculate neuroendocrine (NE) risk score from bulk and single-cell transcriptomics of both human and mouse prostate cancer (P…
  ☆15Updated last year
• Famingzhao / NEPAL
  Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer
  ☆16Updated last year
• lfranzen / spatial-lung-fibrosis
  Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…
  ☆30Updated last year
• liziyie / Onco-fetal-CAF-in-HCC
  ☆22Updated 2 years ago
• phillipnicol / scDist
  Robust identification of perturbed cell types in single-cell RNA-seq data
  ☆36Updated 2 months ago
• qingnanl / gsdensity
  ☆11Updated last year
• zhang-bin-98 / A-spatial-transcriptome-landscape-of-mouse-aging
  ☆16Updated last year
• ChanLab-UTSW / BreastCancer_Integrated
  ☆32Updated 11 months ago
• Xiaxy-XuLab / PanCAF
  ☆37Updated 3 years ago
• Fraternalilab / sciCSR
  Single-Cell Inference of Class Switch Recombination
  ☆20Updated 2 months ago
• jinworks / scAB
  scAB detects multiresolution cell states with clinical significance
  ☆20Updated 3 years ago
• zgyaru / anti-PD1_ESCC
  ☆17Updated 2 years ago
• LuChenLab / inferCC
  Lung cancer 10X analysis
  ☆11Updated 5 years ago
• Teichlab / SKM_ageing_atlas
  ☆13Updated last year
• KramannLab / visium_heart
  Spatial transcriptomics of heart tissue
  ☆28Updated 3 years ago
• ChanghanGitHub / exFINDER
  Identifying external communication signals using single-cell transcriptomics data
  ☆20Updated last year
• bioinfo-biols / SEVtras
  sEV-containing droplet identification in scRNA-seq data (SEVtras)
  ☆26Updated 11 months ago
• AndersonHu85 / ccRCC_multiomics
  ☆17Updated 2 years ago
• YangJAT / HCA
  Hierarchical Cell Annotation
  ☆26Updated last year
• scmethods / scregclust
  ☆14Updated 6 months ago
• MarioniLab / hbca
  Code used to process the data of the HBCA project
  ☆32Updated last year
• Coolgenome / PDAC
  ☆25Updated 11 months ago
• hernet / transcriptional-map-nk
  We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and ti…
  ☆14Updated last year
• Jonyyqn / scMalignantFinder
  scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…
  ☆16Updated last month
• jig4003 / Ragas
  R tools for analysis and visualization of single-cell subclustering data
  ☆17Updated 4 months ago
• ruoyan-li / RCC-spatial-mapping
  Code relating to http://dx.doi.org/10.2139/ssrn.4132721
  ☆11Updated 3 years ago