ZxZhou4150 / Redeconve
Deconvolution of spatial transcriptomics at single-cell resolution
☆17Updated 7 months ago
Alternatives and similar repositories for Redeconve
Users that are interested in Redeconve are comparing it to the libraries listed below
Sorting:
- ☆17Updated last year
- ☆16Updated last year
- ☆16Updated 4 years ago
- Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer☆13Updated 5 months ago
- Lung cancer 10X analysis☆11Updated 4 years ago
- A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types☆11Updated 2 months ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆12Updated 2 years ago
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆13Updated last year
- ☆22Updated 2 years ago
- ☆12Updated last year
- ☆11Updated last year
- Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"☆14Updated 5 months ago
- ☆9Updated 10 months ago
- Code used to process the data of the HBCA project☆27Updated last year
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆22Updated 2 years ago
- R tools for analysis and visualization of single-cell subclustering data☆16Updated last year
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Updated 2 years ago
- ☆17Updated last year
- HCC single cell analysis for Alvarez, Benhammou et al.☆16Updated 3 years ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆26Updated 3 years ago
- ☆9Updated 10 months ago
- ☆10Updated 2 years ago
- ☆12Updated last year
- Custom codes accompanying single cell spatial transcriptomic study on the healthy human lung☆12Updated last year
- Hierarchical Cell Annotation☆20Updated 5 months ago
- The codes and files for the study of subsolid nodules (SSN).☆14Updated 4 years ago
- ☆13Updated 7 years ago
- Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.☆24Updated 10 months ago
- ☆12Updated 3 months ago
- ☆21Updated 4 months ago