camoragaq / BrumiRLinks
BrumiR: A toolkit for de novo discovery of microRNAs from sRNA-seq data.
☆12Updated 3 years ago
Alternatives and similar repositories for BrumiR
Users that are interested in BrumiR are comparing it to the libraries listed below
Sorting:
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 7 months ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- Integrative analysis of structural variations.☆40Updated last year
- Long read to rMATS☆32Updated 2 years ago
- ☆23Updated last week
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 6 months ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆36Updated last year
- A command line tool to compute mapping statistics from a BAM file☆25Updated 3 years ago
- RNA-seq analysis scripts☆15Updated 2 weeks ago
- ☆20Updated 3 years ago
- fastx-utils using klib☆20Updated 5 years ago
- ☆21Updated last year
- Documentation for vcfR☆11Updated 6 months ago
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- ☆10Updated 4 years ago
- Plot CNV data with a genome viewer in R☆15Updated 8 years ago
- Adapters for trimming☆30Updated 6 years ago
- R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework☆41Updated 2 weeks ago
- Evolutionary Transcriptomics with R☆49Updated last week
- UNDER DEVELOPMENT--- Analysis of long non-coding RNAs from RNA-seq datasets☆34Updated 7 months ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 8 months ago
- ☆15Updated 7 years ago
- ☆34Updated last week
- ☆26Updated last year
- Splice junction analysis and filtering from BAM files☆42Updated 3 years ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Updated 6 years ago
- DensityMap is perl tool for the visualization of features density along chromosomes☆19Updated 3 years ago
- Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.☆14Updated 6 years ago
- ☆23Updated 11 months ago
- Toy files and training material to introduce Linux to molecular biologists☆22Updated 2 years ago