McGranahanLab / ImmuneLENSLinks
☆14Updated 5 months ago
Alternatives and similar repositories for ImmuneLENS
Users that are interested in ImmuneLENS are comparing it to the libraries listed below
Sorting:
- ☆49Updated last year
- R package of CSOmap(developing☆14Updated 3 years ago
- cell type specific, trait-associated gene regulation☆27Updated 4 months ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆16Updated 2 years ago
- Computational pipeline to process EasySci-RNA data.☆21Updated last year
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Updated 4 months ago
- Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.☆17Updated 2 years ago
- ☆32Updated 6 months ago
- ☆37Updated last year
- Snakemake pipeline for plate scATAC-seq processing☆26Updated last year
- ☆25Updated last year
- scNOVA : Single-Cell Nucleosome Occupancy and genetic Variation Analysis☆11Updated 2 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated 11 months ago
- Correlation-Based Feature Selection for Single-Cell RNA Sequencing Data☆19Updated 3 years ago
- ☆47Updated 6 months ago
- ☆12Updated last year
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Updated 2 years ago
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆28Updated 3 months ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆43Updated 4 years ago
- R package IReNA☆28Updated 8 months ago
- ☆32Updated 4 years ago
- Dynamic Analysis of Alternative Polyadenylation from single-cell RNA-seq (scDaPars)☆17Updated 4 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆30Updated 2 years ago
- ☆16Updated 4 years ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆26Updated 2 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆27Updated 3 years ago
- ☆27Updated last year
- Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"☆16Updated 8 months ago
- meta-analysis of new and published human WAT single cell data☆14Updated 4 months ago
- 🍹This repo includes the scripts and analysis notebook for the Droplet Hi-C manuscript☆13Updated 3 months ago