☆17Jul 13, 2024Updated last year
Alternatives and similar repositories for DeepGSEA
Users that are interested in DeepGSEA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code for reproducing the Sei manuscript results☆17Jan 25, 2022Updated 4 years ago
- A modular, containerized pipeline for PRO-seq data processing☆11Mar 6, 2026Updated last month
- Implementation of MaSigPro for scRNA-Seq Data☆19Jul 31, 2024Updated last year
- Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.☆31Jun 19, 2024Updated last year
- Save and load your R sessions faster using parallel compression☆26Feb 13, 2019Updated 7 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Learning meaningful representations of genes☆21Jul 7, 2025Updated 9 months ago
- R tools for analysis and visualization of single-cell subclustering data☆18Sep 9, 2025Updated 7 months ago
- ☆12Dec 4, 2023Updated 2 years ago
- GWAS and rare variants tests at high speed using regenie☆16Feb 18, 2026Updated last month
- This is the repository accompanying the pre-print titled, "Genome-wide analyses of 200,453 individuals yield new insights into the causes…☆13Jun 9, 2022Updated 3 years ago
- R package IReNA☆30Nov 13, 2024Updated last year
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆30Jan 6, 2021Updated 5 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆83Aug 10, 2025Updated 7 months ago
- Haplotype-aware Hidden Markov Models for detecting CNVs from bulk RNA-seq☆13Apr 2, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆13Apr 4, 2023Updated 3 years ago
- ☆11Jul 8, 2024Updated last year
- Difference in Intercellular Communication from scRNA-seq data☆25Oct 14, 2025Updated 5 months ago
- ☆41Jun 24, 2025Updated 9 months ago
- ☆12Jun 11, 2023Updated 2 years ago
- ☆46May 4, 2024Updated last year
- R implementation of GeneTrajectory☆69Apr 5, 2024Updated 2 years ago
- ☆23Mar 12, 2026Updated 3 weeks ago
- Analysis and visualization of RNA-Seq results☆30Mar 18, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…☆15Feb 27, 2019Updated 7 years ago
- Ultrafast method to compute single-sample gene set enrichment scores for gene expression or proteomics data☆21Feb 10, 2026Updated last month
- Supplementary information for "Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcript…☆11Jan 15, 2024Updated 2 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆30Dec 3, 2024Updated last year
- ☆12Jan 8, 2026Updated 3 months ago
- ☆17Mar 5, 2026Updated last month
- ☆11Jan 12, 2024Updated 2 years ago
- A permutation-free framework for scalable, robust, and reference-based cell-cell communication analysis in single cell transcriptomics st…☆22Mar 25, 2026Updated 2 weeks ago
- ☆63Aug 26, 2025Updated 7 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Functional Annotation for Single-Cell Transcriptomics☆11Jun 29, 2024Updated last year
- ☆17Jul 19, 2024Updated last year
- ☆17Feb 16, 2024Updated 2 years ago
- ☆13Sep 29, 2023Updated 2 years ago
- Tool for IDentification and Enumeration of Spliced and Unspliced Read Fragments☆15Dec 23, 2025Updated 3 months ago
- Calculate and plot distributions of genomic ranges☆27Apr 23, 2025Updated 11 months ago
- Serves a web interface and RESTful API for reference genome assets.☆12Feb 25, 2026Updated last month