kris-nader / scTherapy
Identification of clone-specific and cancer-selective multi-targeting therapeutic options based on single-cell transcriptomic profiles of cancer patients
☆11Updated 2 months ago
Alternatives and similar repositories for scTherapy:
Users that are interested in scTherapy are comparing it to the libraries listed below
- Cell-type Relationship Analysis Workflow Done Across Distances☆31Updated last month
- ☆20Updated last year
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- Inference of TCR motifs☆30Updated last month
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆29Updated 7 months ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆41Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆24Updated 3 years ago
- ☆30Updated 3 months ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆28Updated 4 months ago
- Single-Cell Inference of Class Switch Recombination☆19Updated last month
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆10Updated last week
- A unified interface to spatial transcriptomics deconvolution tools☆41Updated last week
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆12Updated last year
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆36Updated last month
- ☆55Updated last year
- ☆16Updated 9 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 6 months ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆29Updated 2 years ago
- scWGCNA☆59Updated 2 years ago
- SCENIC+ analyses☆14Updated last year
- ☆49Updated 8 months ago
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆37Updated last year
- ☆47Updated 3 months ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆40Updated 3 months ago
- ☆25Updated 6 months ago
- ☆36Updated 6 months ago
- ☆15Updated 3 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated last month
- ☆21Updated 3 years ago