ziyili20 / CAMLU
Cell Annotation using Machine Learning-based method for the presence of Unknown cells (CAMLU)
☆11Updated 2 years ago
Alternatives and similar repositories for CAMLU:
Users that are interested in CAMLU are comparing it to the libraries listed below
- ☆11Updated last year
- MarcoPolo is a clustering-free approach to the exploration of bimodally expressed genes along with group information in single-cell RNA-s…☆20Updated 4 months ago
- Network construction Algorithm☆21Updated 6 months ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆31Updated last year
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆10Updated 3 weeks ago
- comprehensive analysis of single-cell transcriptomics data☆20Updated 5 months ago
- An R package for visualising cell-cell interactions☆43Updated 7 months ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆26Updated 3 years ago
- Gene Ontology Gene Sets from BioMart☆12Updated last year
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆35Updated 2 weeks ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆23Updated 3 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆26Updated 4 years ago
- R package for analysing meaningful differences in the numbers of cell populations from single-cell phenotypic data☆21Updated 7 months ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆36Updated last week
- Landscape Single Cell Entropy☆19Updated 4 years ago
- ☆45Updated 7 months ago
- ☆54Updated last year
- R package for Flexible dot plots☆29Updated 2 years ago
- Trans-association between HLA and TCR-CDR3☆17Updated last year
- Implements *CellAnnotator (aka *CAT/starCAT), annotating scRNA-Seq with predefined gene expression programs☆21Updated last month
- ☆16Updated 2 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆17Updated 3 years ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆12Updated 2 years ago
- ☆15Updated 3 years ago
- Code to reproduce TNBC analysis and figures☆23Updated 2 years ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆12Updated last year
- R package for analysing single cell data☆52Updated 2 years ago
- ☆17Updated 4 years ago
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆38Updated 6 months ago