Alternatives and similar repositories for miReact:

Users that are interested in miReact are comparing it to the libraries listed below

• tgen / banovichlab
  Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).
  ☆42Updated 11 months ago
• cansysbio / ConsensusTME
  ConsensusTME Gene Sets and R Script
  ☆39Updated 7 months ago
• zhengtaoxiao / Single-Cell-Metabolic-Landscape
  Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data
  ☆23Updated 3 years ago
• omnideconv / spacedeconv
  A unified interface to spatial transcriptomics deconvolution tools
  ☆39Updated last week
• liulab-dfci / lisa2
  ☆29Updated 2 years ago
• prabhakarlab / DUBStepR
  Correlation-Based Feature Selection for Single-Cell RNA Sequencing Data
  ☆19Updated 2 years ago
• PCAWG-11 / Heterogeneity
  Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes
  ☆43Updated 3 years ago
• Teichlab / Genes2Genes
  Aligning gene expression trajectories of single-cell reference and query systems
  ☆52Updated 3 months ago
• shendurelab / single-cell-ko-screens
  Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…
  ☆26Updated 2 years ago
• KlugerLab / DAseq
  ☆39Updated 3 years ago
• OSU-BMBL / scread-protocol
  ☆16Updated 2 years ago
• McGranahanLab / TcellExTRECT
  ☆46Updated last week
• KChen-lab / MEDALT
  Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile
  ☆18Updated last year
• ggjlab / scHCL
  ☆48Updated 4 years ago
• forrest-lab / NATMI
  NATMI: Network Analysis Toolkit for the Multicellular Interactions
  ☆35Updated 3 years ago
• KChen-lab / METAFlux
  ☆52Updated 6 months ago
• lusystemsbio / NetAct
  Network construction Algorithm
  ☆20Updated 4 months ago
• lessonskit / Single-cell-RNA-sequencing-of-human-kidney
  R-code used for single-cell RNA-Seq analysis of kidney data.
  ☆17Updated 5 years ago
• zakieh-tayyebi / CellSpace
  Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace
  ☆36Updated last week
• CFeregrino / scWGCNA
  scWGCNA
  ☆56Updated 2 years ago
• phillipnicol / scDist
  Robust identification of perturbed cell types in single-cell RNA-seq data
  ☆29Updated last month
• JinmiaoChenLab / ezSingleCell2
  ☆52Updated last year
• NBISweden / single-cell_sib_scilifelab
  SIB/Scilifelab autumn school in single cell omics 2019.
  ☆22Updated 5 years ago
• Fraternalilab / sciCSR
  Single-Cell Inference of Class Switch Recombination
  ☆18Updated 5 months ago
• sridnona / cb_sniffer
  mutation(barcode) caller for 10x single cell data
  ☆44Updated 4 years ago
• Teichlab / Pan_fetal_immune
  Collection of scripts for analysis of pan fetal immune atlas
  ☆26Updated 2 years ago
• jumphone / Vector
  Unsupervised Inference of Developmental Directions for Single Cells
  ☆21Updated last year
• HectorRDB / condiments
  Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression
  ☆26Updated last month
• JinmiaoChenLab / FastIntegration
  FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis
  ☆23Updated 2 months ago
• UPSUTER / GEMLI
  ☆29Updated 4 months ago