jin-repo / RACCROCHELinks
Ancestral flowering plant genomes reconstruction
☆13Updated 2 years ago
Alternatives and similar repositories for RACCROCHE
Users that are interested in RACCROCHE are comparing it to the libraries listed below
Sorting:
- Instruction and scripts for reconstructing ancestral genome from pairwise syntenic blocks using MLGO☆13Updated 6 years ago
- fastHaN is a fast and scalable program for constructing haplotype networks for large samples☆12Updated last year
- Robust identification of orthologous Synteny with the Orthology Index☆19Updated last week
- Caculate the genetic distance of Dxy(like Fst) between the two populations form the vcf file .☆8Updated 6 years ago
- use long sequenced reads to close gaps in assemblies☆37Updated 6 years ago
- Centromics: visualing centromeres with multiple omics data☆18Updated last year
- Graph-based Sequence Assembly Toolkit☆19Updated 6 months ago
- Reconstruction of ancestral genome maps☆16Updated 7 years ago
- ☆40Updated last year
- Genome Annotation Pipeline☆35Updated 9 months ago
- scripts☆16Updated 6 years ago
- ☆31Updated 9 months ago
- A genome assembly assessment pipeline.☆37Updated last year
- ☆20Updated 9 months ago
- ☆16Updated 3 years ago
- GERP++ code from Sidow Lab modified by Kevin Thornton to compile properly.☆20Updated 8 years ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆17Updated last year
- ☆12Updated last year
- Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com…☆32Updated 8 months ago
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆33Updated 3 months ago
- Detects Outliers and plots genomic clines from BGC output, and extends the plotting functionality of INTROGRESS to Correlate genomic clin…☆16Updated 7 months ago
- ☆29Updated 2 months ago
- ☆25Updated 3 years ago
- ☆25Updated 2 years ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 2 years ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆40Updated 8 months ago
- Sex assignment through coverage☆18Updated 2 weeks ago
- A shiny application to visualize MCscan result☆36Updated 2 years ago
- ☆27Updated 2 months ago
- Dynamic Elongation of a Genome Assembly Path☆21Updated last year