similab / FSTestLinks
An efficient tool for cross-population fixation index estimation on variant call format files
☆10Updated last year
Alternatives and similar repositories for FSTest
Users that are interested in FSTest are comparing it to the libraries listed below
Sorting:
- SYNPHONI is a tool designed for reconstructing the dynamic evolution of syntenic relationships across all scales of phylogenetic distance…☆11Updated 2 years ago
- Software package for estimating fine-scale recombination rate.☆16Updated 4 years ago
- Deleterious mutation prediction pipeline☆13Updated 10 months ago
- Instruction and scripts for reconstructing ancestral genome from pairwise syntenic blocks using MLGO☆13Updated 7 years ago
- Detects Outliers and plots genomic clines from BGC output, and extends the plotting functionality of INTROGRESS to Correlate genomic clin…☆16Updated last year
- Reconstruction of ancestral genome maps☆16Updated 7 years ago
- a tool to identify species and inter-species hybrids and chromosome copy number variants from short-read data☆19Updated 6 years ago
- Decomposition Into Single-COpy gene trees (DISCO) is a method for decomposing multi-copy gene-family trees while attempting to preserve o…☆10Updated 4 months ago
- Telomere compliment tools☆20Updated last month
- Using de-novo assembly and read-phasing to assemble reference-free diploid genomes☆24Updated last month
- ☆13Updated this week
- ASTRAL for PaRalogs and Orthologs☆21Updated 3 years ago
- Reduction of Althaps and Duplicate Contigs for Improved Hi-C Scaffolding☆20Updated 7 months ago
- ArchaicSeeker is a series of software for detecting archaic introgression sequences and reconstructing introgression history. The latest …☆18Updated 2 months ago
- Diploid genome assembly analysis tools☆14Updated last year
- K-mer based classifier for Y-contig identification from Whole Genome Assemblies☆13Updated 5 years ago
- ☆11Updated 4 years ago
- YAGCloser: Yet-Another-Gap-Closer based on spanning of long reads.☆13Updated 2 years ago
- ☆12Updated 2 years ago
- Calculate Hybrid Index and Heterozygosity from SNP data☆13Updated last month
- ☆28Updated last year
- ☆13Updated last month
- ksrates is a tool to position whole-genome duplications relative to speciation events using substitution-rate-adjusted mixed paralog-orth…☆20Updated last month
- Yet another Hi-C scaffolding tool☆22Updated last year
- HaploSweep is a method for detecting and categorizing soft and hard selective sweeps based on haplotype structure.☆11Updated last year
- A genome assembly assessment pipeline.☆37Updated last year
- ☆16Updated 2 years ago
- Scripts used to perform analyses in Rice et al. (2023)☆15Updated last year
- Analyze and simulate Pool-Seq time series data☆16Updated 3 years ago
- ☆28Updated 6 months ago