sansubs / vcf2pop
☆29Updated last year
Alternatives and similar repositories for vcf2pop
Users that are interested in vcf2pop are comparing it to the libraries listed below
Sorting:
- ☆32Updated 4 years ago
- ☆25Updated 2 months ago
- Transposable Elements MOvement detection using LOng reads☆21Updated this week
- A shiny application to visualize MCscan result☆36Updated 2 years ago
- Transposable element polymorphism identification☆33Updated 4 years ago
- De novo annotation of young retrotransposons☆48Updated 3 years ago
- ☆43Updated 8 years ago
- ☆23Updated last year
- ☆24Updated 7 years ago
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆33Updated last year
- Likelihood-based Selective Sweep Detection☆37Updated last year
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- Gene model transfer from closely related reference genomes using cDNA alignments☆10Updated 4 years ago
- methods for orphan gene prediction paper optimization☆25Updated 3 years ago
- Calculate GC% and GC deviation for circular genomes☆17Updated 4 years ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆55Updated 2 years ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆65Updated last month
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆56Updated 2 years ago
- A (very) simple script to QC Hi-C data.☆25Updated 4 months ago
- Genome Annotation Without Nightmares☆44Updated 3 months ago
- scripts and intermediate files used to annotate TEs in Jiao et al.☆35Updated 7 years ago
- Generates an NCBI .tbl file of annotations on a genome.☆66Updated 7 years ago
- ☆42Updated last year
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆26Updated 6 years ago
- Genome Annotation Pipeline☆35Updated 8 months ago
- A tool for evaluate long-read de novo assembly results☆46Updated 8 months ago
- scripts for sequence and feature conversion, annotation, analysis ...