xtmtd / PLWSLinks
Phylogenomics from Low-coverage Whole-genome Sequencing
☆39Updated 5 years ago
Alternatives and similar repositories for PLWS
Users that are interested in PLWS are comparing it to the libraries listed below
Sorting:
- A tool for plotting CAFE5 gene family expansion/contraction result☆35Updated 2 years ago
- BITACORA: A Bioinformatics tool for gene family annotation☆49Updated 6 months ago
- MitoDNA extending assembler from NGS data☆23Updated 3 months ago
- Data analysis of Funannotate and Orthofinder outputs to Pangenome results☆23Updated 5 years ago
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆88Updated last year
- Plant genome assembly and annotation pipeline using snakemake☆48Updated 6 months ago
- paml documentation and tutorials☆63Updated 6 months ago
- Genome Annotation Pipeline☆42Updated last year
- PlantTribes is a collection of automated gene family analysis pipelines for comparative plant genomics☆38Updated 2 years ago
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆38Updated last year
- LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences.☆51Updated last year
- ☆84Updated last week
- ☆41Updated 2 years ago
- A shiny application to visualize MCscan result☆37Updated 3 years ago
- Genome annotation pipeline☆64Updated last year
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆50Updated 3 months ago
- Documentation for Evolview☆29Updated 4 years ago
- ☆83Updated last year
- Creates Venn diagrams for OrthoMCL output☆17Updated 8 years ago
- Identification of errors in draft genome assemblies with single-base pair resolution for quality assessment and improvement☆74Updated last week
- Neural network classification of TE☆97Updated 2 months ago
- Codes for the lettuce resequencing project in 2020☆31Updated 4 years ago
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆47Updated 5 months ago
- NLR-Annotator upload☆75Updated 2 years ago
- ☆45Updated 3 years ago
- TSEBRA: Transcript Selector for BRAKER☆49Updated 3 weeks ago
- ☆61Updated last year
- Plastid Genome Annotator☆54Updated 5 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56Updated last month
- MCMCtree tutorials☆27Updated last year