xtmtd / PLWSLinks
Phylogenomics from Low-coverage Whole-genome Sequencing
☆39Updated 5 years ago
Alternatives and similar repositories for PLWS
Users that are interested in PLWS are comparing it to the libraries listed below
Sorting:
- paml documentation and tutorials☆68Updated 3 weeks ago
- Genome Annotation Pipeline☆42Updated last year
- MitoDNA extending assembler from NGS data☆22Updated 5 months ago
- A tool for plotting CAFE5 gene family expansion/contraction result☆36Updated 2 years ago
- scripts☆20Updated 7 years ago
- Plant genome assembly and annotation pipeline using snakemake☆52Updated 8 months ago
- LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences.☆51Updated 2 years ago
- Documentation for Evolview☆29Updated 4 years ago
- ☆89Updated 2 months ago
- Neural network classification of TE☆97Updated 3 months ago
- PlantTribes is a collection of automated gene family analysis pipelines for comparative plant genomics☆38Updated 2 years ago
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆93Updated 2 weeks ago
- A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)☆63Updated 6 years ago
- NLR-Annotator upload☆76Updated 2 years ago
- BITACORA: A Bioinformatics tool for gene family annotation☆53Updated last month
- ☆63Updated last year
- A parallel wrapper for LTR_FINDER☆55Updated 10 months ago
- DNA序列比对结果 可视化展示工具☆47Updated 4 years ago
- MCMCtree tutorials☆28Updated last year
- ☆86Updated last year
- ☆45Updated 3 years ago
- Data analysis of Funannotate and Orthofinder outputs to Pangenome results☆23Updated 5 years ago
- Tutorial about R package PopGenome☆43Updated 6 years ago
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆53Updated 5 months ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56Updated 2 weeks ago
- TSEBRA: Transcript Selector for BRAKER☆49Updated 2 months ago
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…☆53Updated 5 years ago
- Some bioinformic domestic scripts.☆35Updated 3 years ago
- Wrapper for the genoPlotR R package. This wrapper makes phylogeny, genbank files and blast comparisons that is needed for the genoPLotR p…☆14Updated 4 years ago
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆38Updated last year