gbradburd / SpaceMix

Related projects ⓘ

Alternatives and complementary repositories for SpaceMix

• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆35Updated 10 months ago
• millanek / fineRADstructure
  A package for population structure inference from RAD-seq data
  ☆31Updated 3 years ago
• bcm-uga / pcadapt
  Performing highly efficient genome scans for local adaptation with R package pcadapt v4
  ☆39Updated last month
• stevemussmann / BayesAss3-SNPs
  Modification of BayesAss 3.0.4 to allow handling of large SNP datasets
  ☆15Updated 2 years ago
• rystanley / genepopedit
  Simple and flexible manipulation of genomic data.
  ☆15Updated 5 months ago
• thierrygosselin / assigner
  Population assignment analysis using R
  ☆17Updated 2 weeks ago
• gehara / PipeMaster
  An R Package to build and simulate coalescent models
  ☆19Updated 7 months ago
• mailund / admixture_graph
  Module for analysing admixture graphs
  ☆28Updated 6 years ago
• BenjaminPeter / rangeexpansion
  ☆11Updated 7 years ago
• marcomilanesi / BITE
  BITE: BioInformatics tools for everyone
  ☆19Updated 3 months ago
• vsbuffalo / msr
  Process MS results in R, in a tidy way
  ☆17Updated 6 years ago
• liamrevell / learnPopGen
  initial commit
  ☆26Updated last year
• champost / ABLE
  ABLE - Approximate Blockwise Likelihood Estimation
  ☆17Updated 6 years ago
• timbeissinger / Maize-Teo-Scripts
  ☆17Updated 8 years ago
• nstenz / TICR
  ☆25Updated 3 years ago
• devillemereuil / bayescenv
  BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.
  ☆19Updated 7 years ago
• mossmatters / phyloscripts
  Helper scripts for processing and visualization of phylogenetics datasets
  ☆25Updated 9 months ago
• ngthomas / microhaplot
  microhaplotype visualizer and analyzer
  ☆18Updated 3 years ago
• LynchLab / MAPGD
  A program for the Maximum-likelihood analysis of population genomic data.
  ☆28Updated 3 years ago
• bodkan / demografr
  Fast and simple simulation-based population genetic inference in R
  ☆27Updated 2 weeks ago
• augusto-garcia / onemap
  Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…
  ☆35Updated 10 months ago
• ANGSD / NgsRelate
  ☆42Updated 11 months ago
• thierrygosselin / stackr
  stackr: an R package to run stacks software pipeline
  ☆28Updated 4 years ago
• EricArcher / strataG
  strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.
  ☆25Updated 6 months ago
• hemstrow / snpR
  ☆28Updated 2 weeks ago
• bbanbury / phrynomics
  A collection of R code for dealing with SNP data and analyses
  ☆23Updated last year
• bodkan / admixr
  An R package for reproducible and automated ADMIXTOOLS analyses
  ☆28Updated 6 months ago
• pimbongaerts / radseq
  Collection of Python scripts for parsing/analyses of RAD-seq data
  ☆22Updated 3 years ago
• halasadi / MAPS
  software for the MAPS method
  ☆24Updated 5 years ago
• weissmanlab / magic
  Minimal Assumption Genomic Inference of Coalescence
  ☆14Updated last year