joepickrell / malder
Automatically exported from code.google.com/p/malder
☆11Updated 9 years ago
Alternatives and similar repositories for malder:
Users that are interested in malder are comparing it to the libraries listed below
- Method to optimally select samples for validation and resequencing☆27Updated 3 years ago
- Software package for estimating fine-scale recombination rate.☆13Updated 3 years ago
- Genome-wide scan for balancing selection using beta statistic☆28Updated last year
- ☆30Updated 5 years ago
- A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline☆26Updated 3 years ago
- assembly evaluation tool☆34Updated 2 years ago
- Create a pseudohaploid assembly from a partially resolved diploid assembly☆32Updated 5 years ago
- Tools to convert to and from vcf format☆14Updated 7 years ago
- Genealogical Estimation of Variant Age (GEVA)☆27Updated 3 years ago
- Compare different genome alignment tools using a wide range of genomes with different complexities.☆13Updated 2 years ago
- An algorithm for centromere assembly using long error-prone reads☆26Updated 3 years ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 6 years ago
- Identification of segmental duplications in the genome☆26Updated 2 years ago
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆46Updated 3 years ago
- Compute N50/NG50 and auN/auNG☆31Updated last year
- Tools and Utilities for msmc and msmc2☆47Updated last year
- ☆42Updated 9 months ago
- An easy way to run BioNano genomic analysis☆27Updated 3 years ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- This is the Haplotypo repository☆20Updated 8 months ago
- building a human pangenome from the HPRCy1v2 genbank accessioned assemblies☆14Updated 2 years ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆47Updated 5 years ago
- Tutorial on using popular tools for learning about population history☆49Updated 6 years ago
- ☆24Updated 7 years ago
- Bayesian reconstruction of ancient DNA fragments☆27Updated 6 months ago
- Population genetics analyses from NGS data☆25Updated 3 years ago
- A Hi-C scaffolding method☆22Updated 3 years ago
- Gene model transfer from closely related reference genomes using cDNA alignments☆10Updated 4 years ago
- Plant genome assembly and annotation pipeline using snakemake☆38Updated last year
- genomic alignment similarity search tool☆19Updated 8 months ago