grahamgower / demesdraw
Drawing functions for Demes demographic models
☆19Updated last month
Related projects: ⓘ
- Software for detecting introgression using supervised machine learning☆18Updated last year
- Tools for inference of the DFE with dadi☆14Updated 3 years ago
- ☆25Updated last year
- ☆17Updated 2 months ago
- Sampling and inference of genealogies with recombination☆22Updated last week
- Tools and Utilities for msmc and msmc2☆44Updated last year
- predicting DFE and alpha from polymorphism data☆27Updated 5 years ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆47Updated last month
- Genealogical Estimation of Variant Age (GEVA)☆27Updated 2 years ago
- Graph-aware Retrieval of Selective Sweeps☆20Updated this week
- Assessing confidence in introgression among four populations☆26Updated 3 years ago
- Population genetics analyses from NGS data☆25Updated 3 years ago
- GitHub repository for GenErode, a Snakemake pipeline for the analysis of whole-genome sequencing data from historical and modern samples …☆23Updated last week
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆35Updated 7 months ago
- Tools to convert to and from vcf format☆14Updated 7 years ago
- Compute N50/NG50 and auN/auNG☆31Updated 11 months ago
- Likelihood-based Selective Sweep Detection☆35Updated 11 months ago
- ASTRAL for PaRalogs and Orthologs☆19Updated 2 years ago
- Estimating repeat spectra and genome length from low-coverage genome skims☆11Updated last year
- A genome-wide IM blockwise likelihood estimation toolkit☆14Updated 2 months ago
- ☆24Updated 7 years ago
- Gene-tree Reconciliation Algorithm with MUL-trees for Polyploid Analysis☆11Updated last year
- A organelle de novo genome assembly toolkit☆30Updated 3 months ago
- ABLE - Approximate Blockwise Likelihood Estimation☆17Updated 6 years ago
- Utilities for analyzing next generation sequencing data☆17Updated 5 years ago
- Scripts for reformatting data. Mainly from tab separated to an esoteric program specific format☆12Updated 4 months ago
- Red: an intelligent, rapid, accurate tool for detecting repeats de-novo on the genomic scale.☆15Updated 4 months ago
- machine learning applications for dadi☆13Updated 5 months ago
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆30Updated 2 years ago
- Genome-wide scan for balancing selection using beta statistic☆27Updated last year