Alternatives and similar repositories for demesdraw

Users that are interested in demesdraw are comparing it to the libraries listed below

• popgenmethods / SINGER
  Sampling and inference of genealogies with recombination
  ☆51Updated 7 months ago
• kr-colab / FILET
  Software for detecting introgression using supervised machine learning
  ☆21Updated 3 years ago
• popgenmethods / momi2
  Infer demographic history with the Moran model
  ☆51Updated 7 months ago
• paula-tataru / polyDFE
  predicting DFE and alpha from polymorphism data
  ☆28Updated 7 years ago
• simonhmartin / twisst2
  Topology weighting from unphased genotypes of any ploidy
  ☆20Updated last month
• russcd / Ancestry_HMM
  ☆32Updated 3 years ago
• MoinSebi / gretl
  Statistics and analysis for variation graphs
  ☆48Updated last year
• Rosemeis / pcangsd
  Framework for analyzing low depth NGS data in heterogeneous populations using PCA.
  ☆58Updated 7 months ago
• tulerpetontidae / psmc-python
  A reimplementation of a classical PSMC method in python for educational purposes
  ☆17Updated last year
• FerRacimo / GRoSS
  Graph-aware Retrieval of Selective Sweeps
  ☆22Updated last year
• AndreaGuarracino / paf2chain
  convert PAF format to CHAIN format
  ☆34Updated 8 months ago
• pangenome / impg
  implicit pangenome graph
  ☆88Updated this week
• RolandFaure / Hairsplitter
  Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.
  ☆35Updated 9 months ago
• stschiff / msmc-tools
  Tools and Utilities for msmc and msmc2
  ☆50Updated 2 weeks ago
• Sendrowski / fastDFE
  Fast and flexible inference of the distribution of fitness effects (DFE), VCF-SFS parsing with ancestral allele and site-degeneracy annot…
  ☆18Updated last week
• ulasisik / balancing-selection
  ☆13Updated 4 years ago
• mmatschiner / F4
  Assessing confidence in introgression among four populations
  ☆28Updated 4 years ago
• vollgerlab / NucFreq
  ☆38Updated 4 months ago
• pangenome / PanSN-spec
  Pangenome Sequence Naming: a backwards-compatible hack to simplify the identification of samples and haplotypes in pangenomes
  ☆44Updated last year
• JanaSperschneider / FindTelomeres
  A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files
  ☆36Updated 3 years ago
• MoritzBlumer / winpca
  WinPCA. A package for windowed principal component analysis.
  ☆45Updated last week
• Plant-Food-Research-Open / genepal
  A Nextflow pipeline for genome and pan-genome annotation
  ☆15Updated last week
• piosierra / pantera
  Identification of transposable element families from pangenome polymorphisms
  ☆55Updated 8 months ago
• OmarOakheart / nPhase
  Ploidy agnostic phasing pipeline and algorithm
  ☆49Updated 2 years ago
• LauritsSkov / Introgression-detection
  ☆47Updated 3 months ago
• lh3 / calN50
  Compute N50/NG50 and auN/auNG
  ☆33Updated 2 years ago
• NBISweden / GenErode
  GitHub repository for GenErode, a Snakemake workflow for the analysis of whole-genome sequencing data from historical and modern samples …
  ☆29Updated last week
• gphocs-dev / G-PhoCS
  G-PhoCS is a software package for inferring ancestral population sizes, population divergence times, and migration rates from individual …
  ☆34Updated 4 years ago
• avaughn271 / AdmixtureBayes
  ☆21Updated last year
• Adamtaranto / teloclip
  A tool for the recovery of unassembled telomeres from soft-clipped read alignments.
  ☆50Updated 2 months ago