devillemereuil / bayescenvLinks
BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.
☆18Updated 8 years ago
Alternatives and similar repositories for bayescenv
Users that are interested in bayescenv are comparing it to the libraries listed below
Sorting:
- Make Pseudo-Reference Genome from VCF/BCF☆14Updated 5 years ago
- ☆17Updated 10 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆29Updated 6 years ago
- A program for the Maximum-likelihood analysis of population genomic data.☆30Updated 4 years ago
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- ☆44Updated 8 months ago
- Genome-wide scan for balancing selection using beta statistic☆29Updated 2 years ago
- Utilities for analyzing next generation sequencing data☆17Updated 7 years ago
- ☆30Updated 3 years ago
- Module for analysing admixture graphs☆29Updated 7 years ago
- Pipeline for structural variant image curation and analysis.☆49Updated 4 years ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆56Updated 5 months ago
- Code and Tutorials for Running the MArginal ePIstasis Test (MAPIT)☆15Updated 3 years ago
- ☆20Updated 5 years ago
- ☆11Updated 3 years ago
- Tools for inference of the DFE with dadi☆14Updated 4 years ago
- Efficient program for calculating Extended Haplotype Homozygosity (EHH) and Integrated Haplotype Score (iHS)☆45Updated 6 years ago
- Demographic inference from whole genomes☆13Updated 3 years ago
- ABLE - Approximate Blockwise Likelihood Estimation☆17Updated 7 years ago
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13Updated 6 years ago
- Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)☆14Updated 2 years ago
- A repo contains historical and updated MTEC libraries.☆18Updated 5 years ago
- Haplotype and population structure inference using neural networks.☆27Updated last year
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆65Updated last month
- Tools and Utilities for msmc and msmc2☆49Updated 4 months ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆43Updated 6 years ago
- ☆15Updated 5 years ago
- Estimation of per-individual inbreeding tracts under a probabilistic framework☆14Updated 2 years ago
- Transposable element polymorphism identification☆34Updated 5 years ago
- These are scripts that I use frequently in genome annotation projects. Some of them have evolved awkwardly so the code is difficult to fo…☆16Updated 8 years ago