devillemereuil / bayescenv
BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.
☆19Updated 7 years ago
Alternatives and similar repositories for bayescenv:
Users that are interested in bayescenv are comparing it to the libraries listed below
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13Updated 5 years ago
- ☆17Updated 9 years ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- A program for the Maximum-likelihood analysis of population genomic data.☆28Updated 3 years ago
- ☆30Updated last week
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆37Updated last year
- Whole-genome bioinformatic pipeline for pooled or individual-based NGS data using bash and R☆20Updated 3 years ago
- Likelihood-based Selective Sweep Detection☆37Updated last year
- Genome-wide scan for balancing selection using beta statistic☆28Updated last year
- Utilities for analyzing next generation sequencing data☆17Updated 6 years ago
- These are scripts that I use frequently in genome annotation projects. Some of them have evolved awkwardly so the code is difficult to fo…☆15Updated 7 years ago
- Make Pseudo-Reference Genome from VCF/BCF☆14Updated 4 years ago
- ABLE - Approximate Blockwise Likelihood Estimation☆17Updated 6 years ago
- An R package to detect selection in biological pathways☆14Updated last year
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆41Updated 5 years ago
- ☆18Updated last year
- Code and binaries related to processing haplotagging data☆14Updated 2 years ago
- General purpose population genetics software☆12Updated 5 years ago
- ☆11Updated 2 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆24Updated 5 years ago
- Assessing confidence in introgression among four populations☆27Updated 3 years ago
- ☆20Updated 4 years ago
- A package for population structure inference from RAD-seq data☆31Updated 3 years ago
- Tools for inference of the DFE with dadi☆14Updated 3 years ago
- Module for analysing admixture graphs☆28Updated 6 years ago
- Detecting natural selection from population-based genetic data☆27Updated 6 years ago
- ☆22Updated 11 months ago
- Tools and Utilities for msmc and msmc2☆47Updated last year
- Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)☆13Updated last year
- ☆43Updated last year