Recombination Landscape Estimation using Recurrent Neural Networks
☆66Mar 27, 2026Updated 2 weeks ago
Alternatives and similar repositories for ReLERNN
Users that are interested in ReLERNN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum☆19Sep 19, 2020Updated 5 years ago
- Ancestry_HMM-S is program designed to infer adaptive introgression from population genomic data☆19Sep 25, 2023Updated 2 years ago
- a short graduate population biology course☆13Feb 22, 2023Updated 3 years ago
- ☆13Aug 18, 2023Updated 2 years ago
- TEFLoN uses paired-end illumina sequence data to discover and genotype transposable elements present in your samples.☆13Mar 5, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Fast inference of fine-scale recombination rates based on fused-LASSO☆61Feb 10, 2026Updated 2 months ago
- A tool for estimating time-dependent migration rates based on cross-/within-population coalescent rates from MSMC☆16Apr 6, 2025Updated last year
- SMC++ infers population history from whole-genome sequence data.☆173Jan 20, 2024Updated 2 years ago
- Automated and Distributed Population Genetic Model Inference from Allele Frequency Spectra☆18Mar 31, 2026Updated last week
- ☆56Jun 12, 2025Updated 10 months ago
- [mu]tation [s]pectrum [h]istory [i]nference☆27Jan 9, 2025Updated last year
- feature-based deep learning for the identification of selective sweeps☆59Mar 31, 2026Updated last week
- Versatile tool for detecting selective sweeps with a variety of ages, strengths, starting allele frequencies, and completeness.☆15Feb 16, 2026Updated last month
- Methods for examining PCA locally along the genome.☆88Aug 13, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Analysis of inference methods on standard population models☆25Dec 3, 2021Updated 4 years ago
- Fast calculation of Patterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species☆186Dec 19, 2024Updated last year
- The powerful `awk` script to calculate pi, Dxy and Fst in polyploid VCF files with mixed-ploidy groups support☆31Apr 4, 2026Updated last week
- ☆16Jan 6, 2022Updated 4 years ago
- discoal is a coalescent simulation program capable of simulating models with recombination, selective sweeps, and demographic changes inc…☆49Mar 20, 2026Updated 3 weeks ago
- General tools for genomic analyses.☆389Mar 25, 2026Updated 2 weeks ago
- tool for dating gene age by micro- and macro-synteny with high speed and accuracy☆15Jan 3, 2026Updated 3 months ago
- The integrated Sequentially Markovian Coalescent☆15Mar 10, 2026Updated last month
- Topology weighting by iterative sampling of sub-trees☆87Jan 5, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ABLE - Approximate Blockwise Likelihood Estimation☆17Jul 4, 2018Updated 7 years ago
- ☆21Oct 2, 2024Updated last year
- Analyze and simulate Pool-Seq time series data☆17Jun 16, 2022Updated 3 years ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆60Jun 27, 2025Updated 9 months ago
- ArchaicSeeker is a series of software for detecting archaic introgression sequences and reconstructing introgression history. The latest …☆20Aug 6, 2025Updated 8 months ago
- deep learning prediction of geographic location from individual genome sequences☆52Jan 20, 2025Updated last year
- Population genetic simulations in R☆63Updated this week
- mixture classification, constraint optimization, outlier detection, population structure, admixture history, and selection detection.☆89Jun 14, 2021Updated 4 years ago
- Quantifying Introgression via Branch Lengths☆57Sep 30, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- GitHub repository for GenErode, a Snakemake workflow for the analysis of whole-genome sequencing data from historical and modern samples …☆31Mar 11, 2026Updated last month
- G-PhoCS is a software package for inferring ancestral population sizes, population divergence times, and migration rates from individual …☆34Apr 27, 2021Updated 4 years ago
- An R package to detect, classify, and visualize genome rearrangements☆15Aug 4, 2020Updated 5 years ago
- Haplotype based scans for selection☆145Apr 1, 2026Updated last week
- MSMC2 Scripts☆28Sep 24, 2025Updated 6 months ago
- Software for painlessly estimating average nucleotide diversity within and between populations☆158Apr 4, 2026Updated last week
- A library of standard population genetic models☆140Mar 23, 2026Updated 2 weeks ago