jcao89757 / SCINALinks
SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples
☆71Updated 4 years ago
Alternatives and similar repositories for SCINA
Users that are interested in SCINA are comparing it to the libraries listed below
Sorting:
- ☆64Updated 6 years ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated 2 years ago
- Publication Page for Satpathy*, Granja* et al 2019☆95Updated 5 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆111Updated 7 months ago
- Create stacked violin plot☆51Updated 3 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 5 years ago
- ☆73Updated 2 years ago
- ☆118Updated 3 months ago
- ☆63Updated 5 years ago
- Pipeline for exploring metebolic heterogeneity at single-cell resolution☆74Updated 5 years ago
- R Package for Single-Cell Dataset Processing and Visualization☆65Updated 4 years ago
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆118Updated last week
- R package for Pathway RespOnsive GENe activity inference☆111Updated 2 years ago
- simpler single cell RNAseq data clustering☆42Updated 9 months ago
- Efficient and precise single-cell reference atlas mapping with Symphony☆112Updated last month
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 7 months ago
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 5 years ago
- A R package for advanced single cell data viz☆68Updated 3 months ago
- Mouse cell atlas☆61Updated 5 years ago
- Analysis of cell-cell communication at single-cell resolution☆105Updated last year
- Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods☆98Updated 2 years ago
- marker-based purification of cell types from single-cell RNA-seq datasets☆131Updated 4 months ago
- Data and analysis scripts for our Embryo Timecourse paper.☆69Updated 5 years ago
- Single cell RNA analysis about paper “Caloric restriction reprograms the single-cell transcriptional landscape of Rattus norvegicus aging…☆29Updated 5 years ago
- R package for Protein activity analysis of single-cell RNAseq.☆85Updated 3 years ago
- inferring cell-cell communication from scRNA-seq of ligand-receptor☆84Updated 2 years ago
- scGSVA: Perform GSVA for single cell RNA seq☆67Updated last year
- Code repository for single cell RNA-seq☆39Updated 5 years ago
- ☆79Updated last year
- A tool that allows to get UMI counts from a single cell protein assay☆86Updated 7 months ago