Alternatives and similar repositories for ulipstic-analysis

Users that are interested in ulipstic-analysis are comparing it to the libraries listed below

• BKI-immuno-KNS / MANAscore
  A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types
  ☆11Updated 10 months ago
• Teichlab / SKM_ageing_atlas
  ☆13Updated last year
• AndersonHu85 / ccRCC_multiomics
  ☆17Updated 2 years ago
• KramannLab / visium_heart
  Spatial transcriptomics of heart tissue
  ☆28Updated 3 years ago
• bioinfo-biols / SEVtras
  sEV-containing droplet identification in scRNA-seq data (SEVtras)
  ☆26Updated 10 months ago
• LuChenLab / inferCC
  Lung cancer 10X analysis
  ☆11Updated 5 years ago
• dpeerlab / progressive-plasticity-crc-metastasis
  Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"
  ☆17Updated last year
• Xiaxy-XuLab / PanCAF
  ☆37Updated 3 years ago
• Jonyyqn / scMalignantFinder
  scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…
  ☆16Updated 3 weeks ago
• Lab-TIGI-UCL / scRNA-seq-atlas-of-TIL-B-cells
  Code generated by Evelyn Fitzsimons (Regmefi)
  ☆11Updated last year
• phillipnicol / scDist
  Robust identification of perturbed cell types in single-cell RNA-seq data
  ☆36Updated 2 months ago
• SunXQlab / scMLnet
  Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks
  ☆29Updated 4 years ago
• shyhihihi / MERCI
  MERCI for tracing of mitochondrion transfer between single cancer and T cells
  ☆26Updated last year
• lfranzen / spatial-lung-fibrosis
  Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…
  ☆29Updated last year
• yanailab / PanCancer
  Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…
  ☆31Updated 3 years ago
• christophhmayr / 2023_Mayr
  Code for the spatial transcriptomic paper on IPF lungs
  ☆19Updated last year
• dpeerlab / pdac-progression
  ☆10Updated 2 years ago
• hernet / transcriptional-map-nk
  We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and ti…
  ☆14Updated last year
• liziyie / Onco-fetal-CAF-in-HCC
  ☆22Updated 2 years ago
• zgyaru / anti-PD1_ESCC
  ☆17Updated 2 years ago
• guangchunhan / LUAD_Code
  ☆25Updated 2 years ago
• SaskiaFreytag / spatial_brain_cancer
  ☆14Updated 2 years ago
• SGDDNB / GeneSwitches
  Ordering gene-expression and functional events in single-cell experiments
  ☆27Updated last year
• Coolgenome / PDAC
  ☆25Updated 10 months ago
• MarioniLab / hbca
  Code used to process the data of the HBCA project
  ☆32Updated last year
• wuaipinglab / scImmuCC
  Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.
  ☆10Updated last year
• FloWuenne / scFunctions
  Functions for single cell data analysis
  ☆32Updated 4 years ago
• sunnyzwu / stromal_subclasses
  code for data processing and visualisation associated with the stromal subclasses manuscript
  ☆13Updated 5 years ago
• shanzha9 / siAgeModel
  ☆13Updated last year
• tiroshlab / Spatial_Glioma
  Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper
  ☆53Updated last year