☆23Mar 29, 2023Updated 3 years ago
Alternatives and similar repositories for Spatial_ATAC-seq
Users that are interested in Spatial_ATAC-seq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Learning notes for DBiT-Notes☆11Nov 28, 2024Updated last year
- A public clone of the HypoMap Figure & analysis repository.☆11Sep 26, 2022Updated 3 years ago
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Jan 30, 2023Updated 3 years ago
- Blastocyst-like structures generated from human pluripotent stem cells☆13Sep 25, 2022Updated 3 years ago
- Repository to reproduce all analyses for Lareau*, Ludwig*, et al. 2020☆21Jul 13, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Patho-DBiT is a platform to spatially decode RNA Biology in archival FFPE tissues.☆14Aug 15, 2024Updated last year
- ☆17Apr 9, 2021Updated 5 years ago
- ☆34Apr 8, 2023Updated 3 years ago
- Identification and targeting of treatment resistant progenitor populations in T-cell Acute Lymphoblastic Leukemia☆15May 16, 2024Updated last year
- ☆18May 12, 2023Updated 2 years ago
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆31Aug 8, 2023Updated 2 years ago
- Spatial RNA velocity☆10Oct 3, 2024Updated last year
- ☆13Mar 29, 2024Updated 2 years ago
- Analytical tools and pipelines for bulk and single cell epigenomic and human genetic data☆26Nov 17, 2020Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Code required to reproduce analysis of the single cell Cut and Tag data in the resource paper (Bartosovic et. al., 2020)☆14Apr 2, 2026Updated 3 weeks ago
- A record of the analysis pipelines used to create the HTAPP data☆34Apr 15, 2025Updated last year
- SMILE: Mutual Information Learning for Integration of Single Cell Omics Data☆11Mar 28, 2023Updated 3 years ago
- A single cell transcriptome atlas of the developing zebrafish hindbrain.☆14Jan 2, 2020Updated 6 years ago
- A pipeline for Smooth-seq data analysis.☆10Sep 23, 2021Updated 4 years ago
- ☆53Oct 9, 2025Updated 6 months ago
- A collection of perl scripts for NGS analysis☆17Oct 2, 2024Updated last year
- Suite of analysis tools for spatial total RNA-sequencing☆12Aug 10, 2023Updated 2 years ago
- Jupyter notebook repository for reproducing analysis in "DNA Methylation Landscape of the Mouse Brain at Single-Cell Resolution"☆14Apr 1, 2020Updated 6 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆21Dec 23, 2024Updated last year
- Transposable element expression at unique loci in single cells with CELLO-seq☆11Jun 17, 2024Updated last year
- ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method …☆93Feb 11, 2026Updated 2 months ago
- Interoperability between SpatialData and the Xenium Explorer☆25Jul 31, 2024Updated last year
- Example scripts for analyzing CUT&RUN datasets☆13Oct 3, 2018Updated 7 years ago
- iFISH Probe Design: a Python3 package to build iFISH probes.☆12Mar 11, 2022Updated 4 years ago
- Code for the "Spatial genomics maps the structure, nature and evolution of cancer clones" paper☆27Nov 21, 2022Updated 3 years ago
- <<------ Use SnapATAC!!☆26Mar 15, 2019Updated 7 years ago
- Reproducing all analyses and figures for the ASAP-seq paper☆29Jun 11, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Probabilistic Alignment of Spatial Transcriptomics Experiments☆102Feb 26, 2025Updated last year
- ☆30Jul 15, 2021Updated 4 years ago
- ☆14Dec 22, 2025Updated 4 months ago
- CellRank's reproducibility repository.☆17Jan 13, 2022Updated 4 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Mar 30, 2024Updated 2 years ago
- single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)☆13Jul 13, 2023Updated 2 years ago
- 基于FPGA实现的流水灯项目☆10Mar 19, 2018Updated 8 years ago