☆24Mar 29, 2023Updated 3 years ago
Alternatives and similar repositories for Spatial_ATAC-seq
Users that are interested in Spatial_ATAC-seq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Dec 22, 2021Updated 4 years ago
- Learning notes for DBiT-Notes☆12Nov 28, 2024Updated last year
- Analysis scripts and notebooks for Numbat paper☆10Aug 12, 2022Updated 4 years ago
- pipeline and scripts for the analysis of scATAC-seq data via DBIT-seq☆14Mar 3, 2026Updated 7 months ago
- Repository to reproduce all analyses for Lareau*, Ludwig*, et al. 2020☆23Jul 13, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Identification and targeting of treatment resistant progenitor populations in T-cell Acute Lymphoblastic Leukemia☆15May 16, 2024Updated 2 years ago
- A public clone of the HypoMap Figure & analysis repository.☆12Sep 26, 2022Updated 4 years ago
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆32Aug 8, 2023Updated 3 years ago
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Jan 30, 2023Updated 3 years ago
- Blastocyst-like structures generated from human pluripotent stem cells☆13Sep 25, 2022Updated 4 years ago
- CellRank's reproducibility repository.☆18Jan 13, 2022Updated 4 years ago
- ☆36Apr 8, 2023Updated 3 years ago
- ☆28Feb 25, 2025Updated last year
- ☆16Apr 9, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- SMILE: Mutual Information Learning for Integration of Single Cell Omics Data☆11Mar 28, 2023Updated 3 years ago
- TRUST4 manuscript evaluation☆17Jul 8, 2022Updated 4 years ago
- Jupyter notebook repository for reproducing analysis in "DNA Methylation Landscape of the Mouse Brain at Single-Cell Resolution"☆14Apr 1, 2020Updated 6 years ago
- ☆18May 12, 2023Updated 3 years ago
- Patho-DBiT is a platform to spatially decode RNA Biology in archival FFPE tissues.☆16Aug 15, 2024Updated 2 years ago
- ☆30Jul 15, 2021Updated 5 years ago
- Spatial RNA velocity☆11Oct 3, 2024Updated 2 years ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆23Mar 25, 2026Updated 7 months ago
- Scripts used to generate the data/figures contained in "Single Cell Transcriptomics Reveals Cell Type Specific Diversification in Human H…☆15Mar 10, 2023Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆30Oct 4, 2024Updated 2 years ago
- Estimate the cis-regulatory activity of transposable element (TEs) subfamilies☆12Dec 15, 2023Updated 2 years ago
- Spatial transcriptomics of heart tissue☆29Jun 16, 2022Updated 4 years ago
- Analytical tools and pipelines for bulk and single cell epigenomic and human genetic data☆27Nov 17, 2020Updated 5 years ago
- single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)☆13Jul 13, 2023Updated 3 years ago
- A record of the analysis pipelines used to create the HTAPP data☆34Apr 15, 2025Updated last year
- A probabilistic factor model for spatial transcriptomics data with subcellular resolution☆26May 3, 2023Updated 3 years ago
- Spatially aware dimension reduction for spatial transcriptomics.☆70Mar 18, 2025Updated last year
- Spatially-aware quality control for spatial transcriptomics☆17Oct 16, 2026Updated 2 weeks ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆14Mar 29, 2024Updated 2 years ago
- A pipeline for Smooth-seq data analysis.☆10Sep 23, 2021Updated 5 years ago
- ☆20May 1, 2023Updated 3 years ago
- ☆57Sep 2, 2026Updated last month
- Tools for generating single-cell gene expression data☆34Jun 20, 2025Updated last year
- Code required to reproduce analysis of the single cell Cut and Tag data in the resource paper (Bartosovic et. al., 2020)☆16Apr 2, 2026Updated 6 months ago
- ☆74May 28, 2025Updated last year