Alternatives and similar repositories for gghic

Users that are interested in gghic are comparing it to the libraries listed below

• sanjaynagi / rna-seq-pop
  Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
  ☆18Updated 7 months ago
• YaoLab-Bioinfo / shinyChromosome
  an R/Shiny application for interactive creation of non-circular plots of whole genomes
  ☆45Updated 6 months ago
• dxsbiocc / ggideogram
  ggideogram is a ggplot2 extension package for drawing chromosome diagrams
  ☆15Updated 11 months ago
• camoragaq / BrumiR
  BrumiR: A toolkit for de novo discovery of microRNAs from sRNA-seq data.
  ☆12Updated 3 years ago
• plantformatics / Socrates
  ☆23Updated 8 months ago
• YaoLab-Bioinfo / intansv
  Integrative analysis of structural variations.
  ☆40Updated last year
• sguizard / DensityMap
  DensityMap is perl tool for the visualization of features density along chromosomes
  ☆19Updated 3 years ago
• mdozmorov / RNA-seq
  RNA-seq analysis scripts
  ☆15Updated 2 weeks ago
• mrcuizhe / interacCircos
  An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot
  ☆28Updated 3 years ago
• XiDsLab / TAGET
  ☆20Updated 3 years ago
• RitataLU / ATACgraph
  ☆15Updated 2 years ago
• YaoLab-Bioinfo / LIRBase
  A comprehensive collection of long inverted repeats in 424 eukaryotic genomes
  ☆16Updated 4 years ago
• dozmorovlab / HiCcompare
  Joint normalization of two Hi-C matrices, visualization and detection of differential chromatin interactions. See multiHiCcompare for the…
  ☆23Updated 2 years ago
• ChrisMaherLab / SV-Hotspot
  ☆10Updated 4 years ago
• guigolab / bamstats
  A command line tool to compute mapping statistics from a BAM file
  ☆25Updated 3 years ago
• flemingtonlab / SpliceTools
  ☆17Updated last year
• sartorlab / methylSig
  R package for DNA methylation analysis
  ☆19Updated last year
• gosianow / DRIMSeq
  Package Homepage: http://bioconductor.org/packages/devel/bioc/html/DRIMSeq.html Bug Reports: https://support.bioconductor.org/p/new/post/…
  ☆11Updated 5 years ago
• czc / nb_distribution
  novoBreak: local assembly for breakpoint detection in cancer genomes
  ☆25Updated 7 years ago
• HenrikBengtsson / TopDom
  R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes
  ☆21Updated 2 years ago
• JBerthelier / ParasiTE
  Invertory of TE-gene isoforms
  ☆13Updated 2 years ago
• IrinaVKuznetsova / CirGO
  ☆21Updated last year
• haowulab / DSS
  ☆16Updated 2 years ago
• liangfan01 / pipeline-for-isoseq
  ☆14Updated 7 years ago
• Xinglab / rMATS-long
  ☆34Updated last week
• marieBvr / TEs_genes_relationship_pipeline
  Distribution of TEs and their relationship to genes in host genome
  ☆23Updated 2 years ago
• Baldridge37 / RNAseq_with_Hisat2_stringtie
  RNAseq analysis with Hisat2, stringtie, and ballgown
  ☆17Updated 6 years ago
• Kuanhao-Chao / RNASeqR
  📊 An R package of RNA-seq workflow
  ☆15Updated 3 years ago
• drostlab / myTAI
  Evolutionary Transcriptomics with R
  ☆49Updated last week
• Bioconductor / GenomicFeatures
  Query the gene models of a given organism/assembly
  ☆27Updated 3 weeks ago