gghic makes visualization of Hi-C/-like data easily in R
☆29Jan 23, 2026Updated 9 months ago
Alternatives and similar repositories for gghic
Users that are interested in gghic are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Analyzing Hi-C data in R with HiCExperiment objects☆16Oct 6, 2026Updated last month
- ☆16Oct 8, 2026Updated 3 weeks ago
- trackc aims to produce beautiful genome tracks that are highly customizable☆19Jun 6, 2026Updated 5 months ago
- Blazing fast toolkit to work with .hic and .cool files☆49Updated this week
- The tool is employed for the visualisation of genome-wide contact heatmaps.☆14Apr 14, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A GUI tools for Gap closed based on assembly graph☆14Nov 4, 2025Updated last year
- ggideogram is a ggplot2 extension package for drawing chromosome diagrams☆21Nov 29, 2024Updated last year
- Extract Sequence from Genome According to Annotation File☆41Apr 16, 2025Updated last year
- Garfield: Genetic Association by Random Forest and InterpretivE Logic Decisions.☆11Jun 30, 2025Updated last year
- ☆12Jun 7, 2024Updated 2 years ago
- Detecting differentially interacting genomic regions from Hi-C contact maps☆12Mar 11, 2024Updated 2 years ago
- The tools are used for displaying hic signal of genome☆25Jan 4, 2021Updated 5 years ago
- Convergence analysis using relative rate and correcting for phylogenetic relatedness☆12Apr 25, 2025Updated last year
- ☆12Jul 24, 2026Updated 3 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A mass non-curated database of potential telomeric repeat sequences across the eukaryotic tree of life.☆13Oct 10, 2026Updated 3 weeks ago
- ☆10Nov 20, 2025Updated 11 months ago
- TGSFilter: An ultra-fast and efficient tool for long reads filtering and trimming☆28May 18, 2024Updated 2 years ago
- HiSV: a computational pipeline for structural variation detection from Hi-C data☆17Jun 20, 2025Updated last year
- Centromics: visualing centromeres with multiple omics data☆28Mar 4, 2025Updated last year
- Classify chimeric reads based on unique kmer contents☆14Aug 30, 2026Updated 2 months ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆46Oct 28, 2026Updated last week
- ☆30Oct 20, 2023Updated 3 years ago
- Repeat and haplotype aware error correction in nanopore sequencing reads with DeChat☆30Apr 24, 2026Updated 6 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An effective alignment tool for long noisy 3C data (e.g. Pore-C and C-walk)☆16Oct 23, 2024Updated 2 years ago
- Robust Eukaryotic Annotation Toolkit☆18Feb 28, 2025Updated last year
- A fast and efficient tool for converting chromatin interaction data between genome assemblies☆78Jul 22, 2025Updated last year
- Fully automatic k-mer based polishing for genome assemblies. Based on original concept and design from Ivan Sovic, Ann McCartney, and Ara…☆11Mar 16, 2026Updated 7 months ago
- ☆45Dec 11, 2025Updated 10 months ago
- A filter algorithm with program to filter an alignment or mapping file☆13May 15, 2025Updated last year
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆35Jan 15, 2025Updated last year
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆38Apr 23, 2025Updated last year
- ☆26Oct 22, 2026Updated 2 weeks ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- An easy-to-use python package can be used for genomic visual analysis☆23Apr 20, 2024Updated 2 years ago
- A integrated pipeline for estimating Convergent accelerated evolutionary conserved non-coding elements☆20Updated this week
- A chromosome-level polyploid phasing scaffolding tool☆29Oct 19, 2026Updated 2 weeks ago
- NeSSie library and tool for the analysis of elements of sequence symmetry in nucleic-acids☆13Jun 26, 2018Updated 8 years ago
- GENome Organisation Visual Analytics☆91Feb 3, 2026Updated 9 months ago
- ☆13Dec 10, 2025Updated 10 months ago
- Interspecies Point Projection - A tool for comparative genomics beyond alignable sequence☆32Sep 22, 2026Updated last month