jasonwong-lab / gghicLinks
gghic makes visualization of Hi-C/-like data easily in R
☆16Updated last week
Alternatives and similar repositories for gghic
Users that are interested in gghic are comparing it to the libraries listed below
Sorting:
- Invertory of TE-gene isoforms☆13Updated 2 years ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 7 months ago
- DataColor: Unveiling Biological Data Relationships through Distinctive Color Mapping☆16Updated 2 years ago
- ggideogram is a ggplot2 extension package for drawing chromosome diagrams☆16Updated last year
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 8 months ago
- A comprehensive collection of long inverted repeats in 424 eukaryotic genomes☆16Updated 4 years ago
- Distribution of TEs and their relationship to genes in host genome☆23Updated 2 years ago
- ☆11Updated 3 years ago
- ☆20Updated 3 years ago
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆22Updated 8 years ago
- R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes☆21Updated 2 years ago
- BrumiR: A toolkit for de novo discovery of microRNAs from sRNA-seq data.☆12Updated 3 years ago
- ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.☆25Updated last year
- Evolutionary Transcriptomics with R☆49Updated last month
- Whole Genome Annotation Pipeline☆16Updated 5 months ago
- Software to assemble contigs/scaffolds into chromosomes using Hi-C data☆28Updated last year
- ☆17Updated 5 years ago
- ☆14Updated 7 years ago
- Repository for pipeline code☆26Updated last year
- TQSLE v1.0 released☆10Updated 2 years ago
- Automated Rice Variant calling workflow for HPC, Cloud and Desktop systems.☆13Updated last year
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆25Updated 5 years ago
- ☆18Updated last year
- scripts used to analyse horizontal transfer and evolution of transposable elements in 307 vertebrate species☆11Updated 4 years ago
- ☆22Updated 6 years ago
- R package for binmap☆12Updated 2 years ago
- CNEFinder: Finding Conserved Non-coding Elements in Genomes☆25Updated 4 years ago
- This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings☆12Updated 4 years ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/DRIMSeq.html Bug Reports: https://support.bioconductor.org/p/new/post/…☆12Updated 5 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆18Updated 6 years ago