Genome annotation pre-publication results
☆27May 1, 2026Updated last week
Alternatives and similar repositories for genecad
Users that are interested in genecad are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tool for exploring sequence alignment algorithms☆14Aug 30, 2024Updated last year
- Robust Eukaryotic Annotation Toolkit☆17Feb 28, 2025Updated last year
- ☆16Apr 16, 2026Updated 3 weeks ago
- The tools are used for displaying hic signal of genome☆25Jan 4, 2021Updated 5 years ago
- A Hi-C scaffolding method☆22Dec 22, 2021Updated 4 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Robust individual and aggregate checksums for nucleotide sequences☆17Mar 3, 2026Updated 2 months ago
- QuickProt: A Fast and Accurate Homology-Based Protein Annotation Tool for Non-Model Organisms to Advance Comparative Genomics☆24Apr 28, 2026Updated last week
- A novel genome assembly pipeline based on deep learning☆70Dec 2, 2024Updated last year
- use long sequenced reads to close gaps in assemblies☆40Sep 4, 2018Updated 7 years ago
- ☆29Jul 16, 2022Updated 3 years ago
- ☆15Jan 28, 2026Updated 3 months ago
- source code for EVM☆124Nov 29, 2024Updated last year
- ANI based satellite annotation☆26Mar 2, 2026Updated 2 months ago
- Draw a dot plot from a paf alignment☆42Apr 24, 2026Updated 2 weeks ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- pangenome from maximal blocks in an MSA☆11Sep 17, 2024Updated last year
- Tools for working with agp files☆19Jun 26, 2025Updated 10 months ago
- ☆21Jan 13, 2026Updated 3 months ago
- ☆12Jun 7, 2024Updated last year
- use paired-end transcriptome reads to scaffold genomes☆11May 30, 2019Updated 6 years ago
- A (very) simple script to QC Hi-C data.☆27Feb 25, 2026Updated 2 months ago
- Portable solution to generate genome alignment chains using lastz☆64Apr 6, 2026Updated last month
- A haplotype-resolved and telomere-to-telomere genome assembly pipeline (PHap) tailored for autopolyploids, relying solely on common seque…☆23Jul 29, 2025Updated 9 months ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆38Mar 5, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- a gap-filling tools of genome in complex region.☆26Dec 30, 2025Updated 4 months ago
- ☆34Mar 19, 2025Updated last year
- Multithreaded read analysis☆25Mar 18, 2026Updated last month
- HAlign 4: A New Strategy for Rapidly Aligning Millions of Sequences☆17Apr 28, 2026Updated last week
- genomic alignment similarity search tool☆18May 15, 2025Updated 11 months ago
- An accurate aligner of long reads to a variation graph, based on co-linear chaining☆35May 23, 2025Updated 11 months ago
- ☆21Feb 15, 2025Updated last year
- SINE annotation tool for plant genomes☆19Jan 21, 2024Updated 2 years ago
- ☆25Jan 8, 2026Updated 4 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- pybio is a comprehensive Python framework designed to streamline genomics operations. It offers a direct interface to Ensembl genome asse…☆15Oct 28, 2025Updated 6 months ago
- Tool for globally phasing diploid assembly graphs with orthogonal data☆43Nov 25, 2024Updated last year
- AlfaPang builds pangenome graphs without alignments or references.☆16Nov 7, 2025Updated 6 months ago
- AccuSyn: An Accurate Web-based Genome Synteny Browser☆16Aug 27, 2024Updated last year
- A "Navie" Implementation of the Wavefront Algorithm For Sequence Alignment with Gap-Affine Scoring☆14Apr 20, 2026Updated 2 weeks ago
- A program for detection of tRNA genes☆89Nov 16, 2022Updated 3 years ago
- A large-scale pretraining dataset for bioimage transfer learning☆16Jul 31, 2022Updated 3 years ago