Genome annotation pre-publication results
☆34Jun 19, 2026Updated 2 weeks ago
Alternatives and similar repositories for genecad
Users that are interested in genecad are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tool for exploring sequence alignment algorithms☆14Aug 30, 2024Updated last year
- Robust Eukaryotic Annotation Toolkit☆17Feb 28, 2025Updated last year
- ☆15Apr 16, 2026Updated 2 months ago
- The tools are used for displaying hic signal of genome☆26Jan 4, 2021Updated 5 years ago
- A Hi-C scaffolding method☆22Dec 22, 2021Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Robust individual and aggregate checksums for nucleotide sequences☆17Mar 3, 2026Updated 4 months ago
- QuickProt: A Fast and Accurate Homology-Based Protein Annotation Tool for Non-Model Organisms to Advance Comparative Genomics☆24Jul 1, 2026Updated last week
- Variant Calling for the HPRC2☆16May 26, 2026Updated last month
- A novel genome assembly pipeline based on deep learning☆71Dec 2, 2024Updated last year
- use long sequenced reads to close gaps in assemblies☆40Sep 4, 2018Updated 7 years ago
- ☆29Jul 16, 2022Updated 3 years ago
- ☆16Jan 28, 2026Updated 5 months ago
- source code for EVM☆126Nov 29, 2024Updated last year
- ANI based satellite annotation☆26Jun 9, 2026Updated last month
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Draw a dot plot from a paf alignment☆45May 9, 2026Updated 2 months ago
- pangenome from maximal blocks in an MSA☆11Sep 17, 2024Updated last year
- Tools for working with agp files☆19Jun 26, 2025Updated last year
- ☆22Jan 13, 2026Updated 5 months ago
- ☆12Jun 7, 2024Updated 2 years ago
- use paired-end transcriptome reads to scaffold genomes☆11May 30, 2019Updated 7 years ago
- A (very) simple script to QC Hi-C data.☆27Feb 25, 2026Updated 4 months ago
- Portable solution to generate genome alignment chains using lastz☆66Jul 2, 2026Updated last week
- A haplotype-resolved and telomere-to-telomere genome assembly pipeline (PHap) tailored for autopolyploids, relying solely on common seque…☆25Jul 29, 2025Updated 11 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆39Mar 5, 2023Updated 3 years ago
- a gap-filling tools of genome in complex region.☆26Dec 30, 2025Updated 6 months ago
- ☆35Jun 24, 2026Updated 2 weeks ago
- Multithreaded read analysis☆25May 24, 2026Updated last month
- HAlign 4: A New Strategy for Rapidly Aligning Millions of Sequences☆18May 23, 2026Updated last month
- genomic alignment similarity search tool☆18Jun 26, 2026Updated last week
- An accurate aligner of long reads to a variation graph, based on co-linear chaining☆35May 23, 2025Updated last year
- ☆21Feb 15, 2025Updated last year
- SINE annotation tool for plant genomes☆19Jan 21, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆26Jan 8, 2026Updated 6 months ago
- Tool for globally phasing diploid assembly graphs with orthogonal data☆43Nov 25, 2024Updated last year
- pybio is a comprehensive Python framework designed to streamline genomics operations. It offers a direct interface to Ensembl genome asse…☆15Jun 30, 2026Updated last week
- AlfaPang builds pangenome graphs without alignments or references.☆17Nov 7, 2025Updated 8 months ago
- AccuSyn: An Accurate Web-based Genome Synteny Browser☆16Aug 27, 2024Updated last year
- A "Navie" Implementation of the Wavefront Algorithm For Sequence Alignment with Gap-Affine Scoring☆14May 29, 2026Updated last month
- A program for detection of tRNA genes☆90Updated this week