seqyuan / trackc
trackc aims to produce beautiful genome tracks that are highly customizable
☆13Updated last month
Alternatives and similar repositories for trackc:
Users that are interested in trackc are comparing it to the libraries listed below
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆18Updated 4 years ago
- ☆16Updated 4 years ago
- ☆15Updated 2 years ago
- A pipeline for identifying conserved topologically associating domain boundaries among multiple species.☆14Updated 7 months ago
- ☆17Updated 2 years ago
- ☆14Updated 6 years ago
- R package to explore active transposable elements with RNA-seq data☆20Updated 2 years ago
- ☆36Updated 5 years ago
- EndHic is a fast and easy-to-use Hi-C scaffolding tool, using the Hi-C links from contig end regions instead of whole contig regions to a…☆19Updated last year
- ☆24Updated 2 years ago
- an efficient Hi-C data processing pipeline☆15Updated 11 months ago
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆21Updated 7 years ago
- HiCnv is used to call copy number variations and breakpoints from Hi-C data☆21Updated 11 months ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆41Updated last year
- A comprehensive pipeline for RNAseq data analysis☆22Updated 6 months ago
- Invertory of TE-gene isoforms☆9Updated last year
- Hi-C Interaction Frequency Inference (HIFI): High-resolution estimation of DNA-DNA interaction frequency from Hi-C data☆23Updated 2 years ago
- ☆33Updated last year
- ☆13Updated last year
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆16Updated 4 months ago
- ☆22Updated 2 years ago
- 4C-seq processing pipeline☆23Updated 10 months ago
- ☆21Updated 8 months ago
- The cattle Genotype-Tissue Expression atlas v1☆23Updated last year
- ☆11Updated 5 years ago
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Updated 5 months ago
- ☆18Updated 10 months ago
- GENE-SWitCH project RNA-Seq analysis pipeline☆25Updated last week
- R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes☆21Updated last year