Alternatives and similar repositories for trackc

Users that are interested in trackc are comparing it to the libraries listed below

• kcakdemir / HiCPlotter
  “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau
  ☆19Updated 5 years ago
• TcbfGroup / Tcbf
  A pipeline for identifying conserved topologically associating domain boundaries among multiple species.
  ☆16Updated 5 months ago
• mortazavilab / cerberus
  ☆20Updated last year
• sunyumail93 / PipeRNAseq
  A comprehensive pipeline for RNAseq data analysis
  ☆22Updated last year
• sc-zhang / bioscripts
  several scripts for bioinformatics
  ☆24Updated 2 weeks ago
• yiliao1022 / Pepper3Dgenome
  ☆16Updated 3 years ago
• dixonlab / hic_breakfinder
  ☆37Updated 6 years ago
• LappalainenLab / lorals_paper_code
  ☆27Updated 3 years ago
• qclian / Pan_Ath
  Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…
  ☆23Updated last year
• XiDsLab / TAGET
  ☆20Updated 3 years ago
• xiaochuanle / Falign
  An effective alignment tool for long noisy 3C data (e.g. Pore-C and C-walk)
  ☆14Updated last year
• ma-compbio / Phylo-HMRF
  ☆17Updated 5 years ago
• biocorecrg / ExOrthist
  ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.
  ☆25Updated last year
• LingbinNi / soybean_pan-3D_genome_analysis
  Pan-3D genome analysis of soybean Hi-C data
  ☆12Updated 2 years ago
• FemeniasM / ExplorATEproject
  R package to explore active transposable elements with RNA-seq data
  ☆21Updated 3 years ago
• schneebergerlab / GameteBinning_tetraploid
  This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings
  ☆12Updated 4 years ago
• tobiaszehnder / IPP
  Interspecies Point Projection - A tool for comparative genomics beyond alignable sequence
  ☆20Updated 3 weeks ago
• JBerthelier / ParasiTE
  Invertory of TE-gene isoforms
  ☆13Updated 2 years ago
• LAILAB-CAU / update-Mo17
  ☆29Updated 2 years ago
• shuzhangcourage / HiC-data-analysis
  General analysis of HiC data, including compartment A/B, domains and loops.
  ☆14Updated 2 years ago
• cfarkas / annotate_my_genomes
  A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes
  ☆30Updated last year
• LappalainenLab / lorals
  ☆38Updated 2 years ago
• LeanQ / SPLITREADER
  Split-read pipeline for the identification of non-reference TE insertions with TSDs
  ☆25Updated 5 years ago
• adamewing / tldr
  Identify and annotate TE-mediated insertions in long-read sequence data
  ☆46Updated 5 months ago
• josiegleeson / BamSlam
  Summarise and plot data from long-read ONT (direct RNA/cDNA) BAM files
  ☆15Updated last year
• liangfan01 / pipeline-for-isoseq
  ☆14Updated 7 years ago
• Augroup / miniQuant
  Improving gene isoform quantification with miniQuant
  ☆29Updated 2 months ago
• FAANG / analysis-TAGADA
  GENE-SWitCH project RNA-Seq analysis pipeline
  ☆29Updated 9 months ago
• baoxingsong / dCNS
  conserved non-coding sequence
  ☆16Updated 3 years ago
• WGLab / DeepRepeat
  An accurate repeat detection from Nanopore data using deep learning and image techniques
  ☆24Updated 2 years ago