xiaochuanle / FalignLinks
An effective alignment tool for long noisy 3C data (e.g. Pore-C and C-walk)
☆12Updated last year
Alternatives and similar repositories for Falign
Users that are interested in Falign are comparing it to the libraries listed below
Sorting:
- ☆15Updated last year
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆19Updated 5 years ago
- ☆43Updated last year
- A pipeline for identifying conserved topologically associating domain boundaries among multiple species.☆16Updated 4 months ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- C-Phasing/CPhasing: Phasing and scaffolding polyploid genomes based on Pore-C, HiFi-C/CiFi or Hi-C.☆65Updated 3 months ago
- ☆15Updated 3 years ago
- ☆16Updated 2 years ago
- ☆17Updated 10 months ago
- ☆31Updated 5 years ago
- ☆31Updated 9 months ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆44Updated 3 months ago
- Integrate multiple genome assemblies into a pangenome graph☆35Updated 3 years ago
- A pipeline for isoseq☆23Updated 7 years ago
- A module for improving the insertion sequences of structural variant calls☆32Updated 4 years ago
- ☆17Updated 4 years ago
- HiC-Hiker: A probabilistic model to determine contig orientation in chromosome-length scaffolds with Hi-C☆26Updated 4 years ago
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆23Updated last year
- ☆38Updated 3 weeks ago
- A gene fusion caller for long-read transcriptome sequencing data.☆20Updated last year
- ☆19Updated 10 months ago
- Copy number variant caller and depth visualization utility for PacBio HiFi reads☆44Updated last year
- MethPhaser: methylation-based haplotype phasing of human genomes☆50Updated 7 months ago
- The tools are used for displaying hic signal of genome☆24Updated 4 years ago
- ☆36Updated last year
- Draw a dot plot from a paf alignment☆34Updated last month
- ☆24Updated 2 years ago
- Variant annotation and merging pipeline☆39Updated 3 months ago
- Identification of conserved non-coding sequences in plants☆29Updated 3 weeks ago
- This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings☆12Updated 4 years ago