Centromics: visualing centromeres with multiple omics data
☆25Mar 4, 2025Updated last year
Alternatives and similar repositories for Centromics
Users that are interested in Centromics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆14Apr 28, 2020Updated 5 years ago
- The complete reference genome for grapevine (Vitis vinifera L.) genetics and breeding☆14Feb 11, 2025Updated last year
- WGDI: A user-friendly toolkit for evolutionary analyses of whole-genome duplications and ancestral karyotypes☆162Nov 4, 2025Updated 4 months ago
- Convert Tandem Repeat Finder dat file output into gff3 format☆31Nov 9, 2025Updated 4 months ago
- ☆31Apr 7, 2025Updated 11 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- TEsorter: an accurate and fast method to classify LTR-retrotransposons in plant genomes☆107Nov 17, 2025Updated 4 months ago
- Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results☆14Mar 11, 2019Updated 7 years ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Dec 7, 2022Updated 3 years ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆50Feb 9, 2026Updated last month
- ☆30Mar 3, 2026Updated 3 weeks ago
- Make colorful identity heatmaps of genomic sequence☆128May 24, 2024Updated last year
- ☆33Mar 19, 2025Updated last year
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆33Sep 11, 2025Updated 6 months ago
- HELIANO is a software for detection and classification of Helitron-like elements.☆33Jun 10, 2025Updated 9 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- ☆16Dec 25, 2024Updated last year
- ☆24Dec 15, 2025Updated 3 months ago
- Tool for globally phasing diploid assembly graphs with orthogonal data☆43Nov 25, 2024Updated last year
- R package for comparison of synteny conservation at the genome-wide scale.☆14Jun 6, 2024Updated last year
- HapHiC: a fast, reference-independent, allele-aware scaffolding tool based on Hi-C data☆255Jan 5, 2026Updated 2 months ago
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆69May 22, 2021Updated 4 years ago
- Identify and find telomeres, or telomeric repeats in a genome.☆161Nov 24, 2025Updated 4 months ago
- RepeatIdentifier☆72Mar 19, 2025Updated last year
- A tool for quick and accurate calculation of syntenic diversity.☆42Sep 22, 2025Updated 6 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- An ultra-fast gzip file tools☆27Apr 25, 2024Updated last year
- Repeat-aware polishing genomes assembled using HiFi long reads☆98Nov 12, 2025Updated 4 months ago
- This is the standalone version of the EviAnn pipeline☆143Mar 13, 2026Updated 2 weeks ago
- The tools are used for displaying hic signal of genome☆25Jan 4, 2021Updated 5 years ago
- Portable solution to generate genome alignment chains using lastz☆63Dec 20, 2025Updated 3 months ago
- ☆186Feb 10, 2026Updated last month
- Long-reads Gap-free Chromosome-scale Assembler☆79Mar 21, 2023Updated 3 years ago
- To phase, partition and visualize subgenomes of a neoallopolyploid or hybrid based on the subgenome-specific repetitive kmers.☆70Mar 23, 2025Updated last year
- The complete sequence of a Chinese individual☆12Oct 8, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆12Jun 7, 2024Updated last year
- An ultra-fast and efficient tool for high frequency kmer sequencing reads extraction☆19Mar 6, 2024Updated 2 years ago
- A Toolkit for analyzing next-generation DNA Re-Sequencing data☆15Feb 15, 2022Updated 4 years ago
- HiC-Hiker: A probabilistic model to determine contig orientation in chromosome-length scaffolds with Hi-C☆26Jan 14, 2021Updated 5 years ago
- Reduce genome assembly redundancy using shared mapped k-mer method.☆15Apr 28, 2025Updated 11 months ago
- Create a pseudohaploid assembly from a partially resolved diploid assembly☆32Nov 22, 2019Updated 6 years ago
- This is a method to find telomeres and centromeres in plants.☆42Jun 17, 2023Updated 2 years ago