klarman-cell-observatory / Riboseq-nuORFsLinks
☆11Updated 5 years ago
Alternatives and similar repositories for Riboseq-nuORFs
Users that are interested in Riboseq-nuORFs are comparing it to the libraries listed below
Sorting:
- ☆49Updated 3 years ago
- a toolset for mining multi-dimensional features of the translatome with ribosome profiling data☆18Updated 4 months ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆39Updated 10 months ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- Regression-based annotation of protein-coding sequences from ribosome profiling data☆32Updated 5 years ago
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆52Updated 6 years ago
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction☆22Updated 2 years ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆62Updated 2 months ago
- pTuneos: prioritizing Tumor neoantigen from next-generation sequencing data☆38Updated 4 years ago
- pyJASPAR: A Pythonic interface to JASPAR transcription factor motifs☆34Updated last month
- A list of alternative splicing analysis resources☆46Updated 8 months ago
- Splicing Neo Antigen Finder (SNAF) is an easy-to-use Python package to identify splicing-derived tumor neoantigens from RNA sequencing da…☆51Updated 10 months ago
- BAGEL software☆28Updated last year
- ☆15Updated 3 years ago
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆20Updated 8 months ago
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆20Updated 4 months ago
- Predicting gene expression levels from genomic sequences☆55Updated 5 years ago
- Webpage of the "Introduction to RNA-Seq: From quality control to pathway analysis - streamed" SIB course.☆16Updated 2 months ago
- ☆22Updated last year
- Analysis pipeline for the GUIDE-seq assay.☆29Updated 4 months ago
- ☆43Updated last week
- off-targeting assessment of Cas9 gRNAs☆15Updated 4 years ago
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆43Updated last month
- A network-based approach for exon set enrichment☆15Updated 4 months ago
- ChIP-Atlas: Browse and analyze all public ChIP/DNase-seq data on your browser☆80Updated last week
- ☆36Updated 3 years ago
- MeRIPseqPipe:An integrated analysis pipeline for MeRIP-seq data based on Nextflow.☆42Updated last year
- Comprehensive design of CRISPR gRNAs for nucleases and base editors☆26Updated last week
- ☆21Updated 3 years ago
- model-based understanding of single-cell CRISPR screening☆26Updated last year