RegnerM2015 / scBreast_scRNA_scATAC_2024Links
Repository to store code used for the analyses presented in "Defining the Regulatory Logic of Breast Cancer Using Single-Cell Epigenetic And Transcriptome Profiling"
☆18Updated 4 months ago
Alternatives and similar repositories for scBreast_scRNA_scATAC_2024
Users that are interested in scBreast_scRNA_scATAC_2024 are comparing it to the libraries listed below
Sorting:
- ☆48Updated 3 years ago
- ☆17Updated 2 years ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆42Updated 2 years ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆22Updated last year
- Spatial transcriptomics of heart tissue☆25Updated 3 years ago
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆28Updated last year
- Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data☆17Updated 9 months ago
- ☆31Updated 6 months ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆27Updated 4 years ago
- ☆31Updated 3 years ago
- ☆37Updated 3 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆76Updated last month
- Code for single-cell eQTL analysis of memory T cell data in Nathan, et al. bioRxiv (2021)☆20Updated 2 years ago
- ☆12Updated last year
- ☆17Updated last year
- ☆51Updated last year
- ☆58Updated last year
- Functional Inference of Gene Regulation☆46Updated last year
- ☆32Updated last year
- ☆17Updated 2 years ago
- Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…☆51Updated 4 years ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Updated 7 months ago
- Draw phylogenetic trees of tumor evolution☆86Updated 2 years ago
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆52Updated 8 months ago
- Functions for single cell data analysis☆32Updated 4 years ago
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆16Updated 2 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆38Updated 4 years ago
- ☆14Updated 2 years ago
- Accurate and fast cell marker gene identification with COSG☆50Updated 5 months ago
- ☆22Updated last year