RegnerM2015 / scBreast_scRNA_scATAC_2024Links
Repository to store code used for the analyses presented in "Defining the Regulatory Logic of Breast Cancer Using Single-Cell Epigenetic And Transcriptome Profiling"
☆16Updated 2 weeks ago
Alternatives and similar repositories for scBreast_scRNA_scATAC_2024
Users that are interested in scBreast_scRNA_scATAC_2024 are comparing it to the libraries listed below
Sorting:
- Code relating to http://dx.doi.org/10.2139/ssrn.4132721☆10Updated 2 years ago
- ☆12Updated last year
- ☆15Updated last year
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆25Updated 3 months ago
- ☆16Updated last year
- MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via…☆22Updated last year
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆26Updated 3 years ago
- ☆22Updated 2 years ago
- Spatial transcriptomics of heart tissue☆21Updated 2 years ago
- Code for single-cell eQTL analysis of memory T cell data in Nathan, et al. bioRxiv (2021)☆19Updated last year
- Computational pipeline to process EasySci-RNA data.☆20Updated last year
- Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)☆28Updated 4 months ago
- ☆37Updated 2 years ago
- ☆17Updated last year
- Unsupervised Inference of Developmental Directions for Single Cells☆21Updated last year
- ☆10Updated 2 years ago
- ☆18Updated last year
- Single-Cell Inference of Class Switch Recombination☆19Updated 2 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆26Updated 3 years ago
- HCC single cell analysis for Alvarez, Benhammou et al.☆16Updated 3 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆28Updated 6 months ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆31Updated 6 months ago
- ☆9Updated 10 months ago
- ☆19Updated 2 weeks ago
- ☆30Updated 3 months ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆30Updated 2 years ago
- Functions for single cell data analysis☆32Updated 4 years ago
- ☆13Updated 7 months ago
- ☆13Updated last year