zhouhufeng / FAVORannotatorLinks
☆21Updated 2 years ago
Alternatives and similar repositories for FAVORannotator
Users that are interested in FAVORannotator are comparing it to the libraries listed below
Sorting:
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆42Updated 10 months ago
- Cross-population fine-mapping☆37Updated 10 months ago
- ☆63Updated 3 years ago
- A tool to plot significant regions of GWAS☆29Updated 2 years ago
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆47Updated last week
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆25Updated 11 months ago
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆54Updated last year
- Enhanced version of the FastQTL QTL mapper☆70Updated 2 years ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 8 years ago
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆85Updated 2 years ago
- Colocalization analysis of genetic association signals☆53Updated 4 months ago
- A collection of modules to process and analyze IMGT-HLA sequences.☆28Updated 2 years ago
- ☆40Updated 7 years ago
- Fast, integrative fine mapping with functional data☆60Updated 6 years ago
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆67Updated 7 months ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago
- Manhattan++☆28Updated last year
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆31Updated 10 months ago
- ☆23Updated 3 months ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆41Updated 2 years ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆50Updated 7 months ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆46Updated 2 years ago
- Create regional association plots from GWAS or meta-analysis☆61Updated 5 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Updated 3 years ago
- causal TWAS (cTWAS)☆46Updated last month
- An accurate and efficient HLA imputation method.☆26Updated 2 years ago
- Mediated Expression Score Regression (MESC)☆26Updated 3 years ago
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆36Updated last year
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆71Updated last year