Alternatives and similar repositories for FAVORannotator:

Users that are interested in FAVORannotator are comparing it to the libraries listed below

• xihaoli / MetaSTAAR
  An R package for performing MetaSTAAR procedure in whole-genome sequencing studies
  ☆22Updated 5 months ago
• thewonlab / H-MAGMA
  ☆32Updated last year
• pgxcentre / region-plot
  A tool to plot significant regions of GWAS
  ☆29Updated 2 years ago
• jxzb1988 / MMQTL
  MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…
  ☆11Updated last week
• bhattacharya-a-bt / isotwas
  ☆21Updated 3 months ago
• xihaoli / STAARpipeline-Tutorial
  The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…
  ☆28Updated 4 months ago
• anastasia-lucas / hudson
  An R package for creating mirrored Manhattan plots
  ☆18Updated 2 years ago
• getian107 / SuSiEx
  Cross-population fine-mapping
  ☆34Updated 4 months ago
• cgrace1978 / manhplot
  Manhattan++
  ☆28Updated last year
• jianyangqt / osca
  ☆20Updated last year
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆51Updated 4 months ago
• douglasyao / mesc
  Mediated Expression Score Regression (MESC)
  ☆26Updated 2 years ago
• myles-lewis / locuszoomr
  A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.
  ☆42Updated last month
• jinghuazhao / TWAS-pipeline
  TWAS-pipeline
  ☆22Updated 4 years ago
• freeseek / gwaspipeline
  ☆40Updated 7 years ago
• Marijn-Schipper / FLAMES
  FLAMES: Accurate gene prioritization in GWAS loci
  ☆31Updated last month
• cuelee / pleio
  ☆19Updated last year
• ilarsf / gwasTools
  Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)
  ☆30Updated last year
• yiminghu / post-GWAS-pipeline
  A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data
  ☆28Updated 2 years ago
• KeinanLab / xwas-3.0
  A Toolset for Chromosome X-Wide Association Studies
  ☆10Updated 6 years ago
• saralpulit / gwas-scripts
  A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…
  ☆20Updated 7 years ago
• xqwen / dap
  software package for integrative genetic association analysis
  ☆34Updated last year
• jinghuazhao / FM-pipeline
  A Fine-Mapping pipeline
  ☆19Updated 5 years ago
• RitchieLab / GWAS-QC
  Quality control steps for GWAS
  ☆21Updated last year
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆44Updated last year
• Nealelab / whole_genome_analysis_pipeline
  ☆18Updated last year
• eQTL-Catalogue / eQTL-Catalogue-resources
  ☆46Updated 5 months ago
• ZikunY / CARMA
  GWAS genetics Fine-mapping method
  ☆22Updated 5 months ago
• xqwen / torus
  QTL Discovery using Annotations
  ☆24Updated 2 years ago
• slowkow / proxysnps
  Get SNP proxies from the 1000 Genomes Project.
  ☆28Updated 6 years ago