Alternatives and similar repositories for FAVORannotator

Users that are interested in FAVORannotator are comparing it to the libraries listed below

• xihaoli / MetaSTAAR
  An R package for performing MetaSTAAR procedure in whole-genome sequencing studies
  ☆23Updated 6 months ago
• pgxcentre / region-plot
  A tool to plot significant regions of GWAS
  ☆29Updated 2 years ago
• thewonlab / H-MAGMA
  ☆32Updated last year
• xihaoli / STAARpipeline-Tutorial
  The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…
  ☆29Updated 6 months ago
• jxzb1988 / MMQTL
  MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…
  ☆11Updated 2 months ago
• getian107 / SuSiEx
  Cross-population fine-mapping
  ☆36Updated 5 months ago
• cgrace1978 / manhplot
  Manhattan++
  ☆28Updated last year
• yanglab-emory / TIGAR
  ☆21Updated 2 months ago
• anastasia-lucas / hudson
  An R package for creating mirrored Manhattan plots
  ☆18Updated 2 years ago
• douglasyao / mesc
  Mediated Expression Score Regression (MESC)
  ☆26Updated 2 years ago
• jianyangqt / osca
  ☆20Updated last year
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆32Updated 4 years ago
• bhattacharya-a-bt / isotwas
  ☆22Updated 4 months ago
• xqwen / torus
  QTL Discovery using Annotations
  ☆25Updated 2 years ago
• jinghuazhao / TWAS-pipeline
  TWAS-pipeline
  ☆22Updated 4 years ago
• mancusolab / twas_sim
  Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform …
  ☆26Updated last year
• saralpulit / gwas-scripts
  A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…
  ☆20Updated 7 years ago
• KeinanLab / xwas-3.0
  A Toolset for Chromosome X-Wide Association Studies
  ☆10Updated 7 years ago
• xqwen / dap
  software package for integrative genetic association analysis
  ☆34Updated last year
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆53Updated 3 weeks ago
• eQTL-Catalogue / eQTL-Catalogue-resources
  ☆47Updated 2 weeks ago
• karltayeb / cafeh
  ☆13Updated 2 years ago
• francois-a / fastqtl
  Enhanced version of the FastQTL QTL mapper
  ☆65Updated 2 years ago
• Nealelab / whole_genome_analysis_pipeline
  ☆18Updated last year
• weizhou0 / GATE
  ☆22Updated last year
• wuyangf7 / OPERA
  This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…
  ☆36Updated 8 months ago
• hakyimlab / gtex-gwas-analysis
  ☆22Updated 3 years ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆45Updated last year
• stormlovetao / eQTLQC
  ☆26Updated 4 years ago
• myles-lewis / locuszoomr
  A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.
  ☆45Updated 3 months ago