kkdey / GSSGLinks
Gene Set + S2G strategy annotations analyzed for disease architecture
☆55Updated 2 years ago
Alternatives and similar repositories for GSSG
Users that are interested in GSSG are comparing it to the libraries listed below
Sorting:
- identifying disease critical cell types and programs from single cell RNAseq☆57Updated 3 years ago
- ☆39Updated last month
- ☆59Updated last year
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- scWGCNA☆61Updated 2 years ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated last year
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Updated 9 months ago
- ☆20Updated 2 weeks ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- ☆17Updated last year
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last year
- Ordering gene-expression and functional events in single-cell experiments☆24Updated last year
- ☆51Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- Single-cell Case Control Analysis☆52Updated this week
- ☆32Updated 9 months ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆55Updated 4 months ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated 10 months ago
- R package IReNA☆28Updated 11 months ago
- Functional Inference of Gene Regulation☆48Updated last year
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 4 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated last month
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆77Updated 6 months ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆26Updated 3 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated 2 years ago
- Code repository for the snRNA-seq cross-tissue atlas project☆21Updated 3 years ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆21Updated last year
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 3 years ago
- An end-to-end computational pipeline for large Perturb-seq screens☆14Updated 6 months ago