☆20Apr 30, 2025Updated last year
Alternatives and similar repositories for pascient
Users that are interested in pascient are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PULSAR: a Foundation Model for Multi-scale and Multicellular Biology☆33Mar 1, 2026Updated 2 months ago
- SIGnature is a Python package that empowers researchers to rapidly query gene sets across diverse single-cell RNA sequencing (scRNA-seq) …☆24Apr 16, 2026Updated last month
- Python code for cross-condition label refinement in single-cell data with HiDDEN☆14Sep 21, 2024Updated last year
- [COLM 2024] Large Language Models as Biomedical Hypothesis Generators: A Comprehensive Evaluation☆15Jul 15, 2024Updated last year
- ☆65Sep 13, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆29Sep 4, 2023Updated 2 years ago
- Python package for conversions between ENSEMBL IDs and gene names (annotables + pyensembl)☆11Feb 2, 2026Updated 3 months ago
- GIANT (Gene-based data Integration and ANalysis Technique) is a method for large-scale joint analyses of atlas-level single cell data.☆14Jun 13, 2023Updated 2 years ago
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆32Jan 21, 2024Updated 2 years ago
- A clustering algorithm that can perform internal validation inspired by forest fire dynamics and self-organized criticality☆18May 18, 2022Updated 4 years ago
- ☆16Dec 3, 2025Updated 5 months ago
- Unified knowledge-driven network inference from omics data☆101Updated this week
- [Cell Patterns] Codes for paper: scELMo: Embeddings from Language Models are Good Learners for Single-cell Data Analysis☆24Jan 31, 2026Updated 3 months ago
- It discovers linear dependent columns and then replaces linear dependent columns with linearly independent columns that span the space o…☆16Jul 4, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆53Oct 9, 2025Updated 7 months ago
- Transformer Based Embeddings of Wasserstein Distance☆26Feb 18, 2026Updated 3 months ago
- ☆17Jul 12, 2024Updated last year
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆86Apr 21, 2025Updated last year
- PlaNet: Predicting population response to drugs via clinical knowledge graph☆32Mar 13, 2025Updated last year
- Implementation of the Latent CCM paper☆18Jun 8, 2024Updated last year
- Learning meaningful representations of genes☆21Jul 7, 2025Updated 10 months ago
- Python Toolkit for Transcription Factor Activity Inference and Clustering of scRNA-seq Data☆37Dec 15, 2025Updated 5 months ago
- 🏃 The go-to single-cell Foundation Model☆146Feb 20, 2026Updated 2 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Integrate Any Omics: Towards genome-wide data integration for patient stratification☆61May 19, 2025Updated last year
- Single-Cell Analysis of Inter-Individual Variability by Interpretable Tensor Decomposition☆64Apr 14, 2024Updated 2 years ago
- CellDrift: temporal perturbation effects for single cell data☆13Dec 3, 2022Updated 3 years ago
- ☆26Dec 10, 2025Updated 5 months ago
- ☆10Dec 17, 2025Updated 5 months ago
- Weakly supervised learning uncovers phenotypic signatures in single-cell data☆40Dec 17, 2025Updated 5 months ago
- ☆106Aug 26, 2025Updated 8 months ago
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆12May 31, 2024Updated last year
- methylR: a single shiny solution from sequencer data to pathway analysis☆12Oct 30, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- CancerFoundation: A single-cell RNA sequencing foundation model to decipher drug resistance in cancer☆30Sep 12, 2025Updated 8 months ago
- ☆27Apr 9, 2025Updated last year
- ☆67Updated this week
- Jeroen Cottaar's work for the Kaggle Geophysical Waveform Inversion competition (2nd place)☆13Aug 11, 2025Updated 9 months ago
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆79Mar 7, 2025Updated last year
- Genotype-Neighborhood Associations: A tool for identifying genetic variant associations to the abundance of cell states in single-cell d…☆17Oct 5, 2024Updated last year
- ☆15Dec 8, 2023Updated 2 years ago