hanyue36 / nanoplexerLinks
Tool for demultiplexing Nanopore barcode sequence data
☆25Updated 4 years ago
Alternatives and similar repositories for nanoplexer
Users that are interested in nanoplexer are comparing it to the libraries listed below
Sorting:
- Tumour-only somatic mutation calling using long reads☆28Updated last year
- Error correction of ONT transcript reads☆58Updated 2 years ago
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆46Updated last month
- ☆49Updated last year
- ☆81Updated 7 months ago
- Long-read splice alignment with high accuracy☆63Updated last year
- Identify and annotate TE-mediated insertions in long-read sequence data☆44Updated 3 months ago
- MethPhaser: methylation-based haplotype phasing of human genomes☆50Updated 7 months ago
- ☆51Updated 6 years ago
- DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets☆30Updated 2 years ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- Method for inferring path posterior probabilities and abundances from pangenome graph read alignments☆58Updated last month
- Structural variant caller☆55Updated 3 years ago
- MarginPolish: Graph based assembly polishing☆47Updated 4 years ago
- A gene fusion caller for long-read transcriptome sequencing data.☆20Updated last year
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆34Updated last year
- Genotype and phase short tandem repeats using Illumina whole-genome sequencing data☆32Updated 4 years ago
- new repo☆28Updated 4 years ago
- ☆13Updated 2 years ago
- Long read alignment analysis. Generate a reports on sequence alignments for mappability vs read sizes, error patterns, annotations and r…☆49Updated 7 years ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆69Updated 4 months ago
- ☆24Updated last month
- ☆34Updated 2 years ago
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆52Updated 7 months ago
- Simple library/pipeline to generate and handle Hi-C data.☆39Updated 11 months ago
- A new tool to infer sex from massively parallel sequencing data.☆17Updated 5 months ago
- Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads☆21Updated 3 years ago
- ☆32Updated last year
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆37Updated 6 months ago
- ☆30Updated 4 years ago