Alternatives and similar repositories for MobiDB-lite

Users that are interested in MobiDB-lite are comparing it to the libraries listed below

• KULL-Centre / _2022_functional-sites-cagiada
  ☆22Updated 2 years ago
• esbgkannan / kibby
  A fast, alignment-free method for estimating sequence conservation using protein sequence embedding
  ☆17Updated 2 years ago
• ThomasCMcLean / LazyAF
  Code for LazyAF pipeline
  ☆20Updated last year
• psipred / merizo_search
  Fast protein domain structure embedding+search tool
  ☆25Updated 2 months ago
• tymor22 / protein-vec
  Repository for Protein-Vec, a protein embedding mixture of experts model
  ☆38Updated last year
• kaistsystemsbiology / DeepProZyme
  DeepECtransformer
  ☆26Updated last year
• walterlab-HMS / SPOC
  Code repository for the SPOC tool for scoring binary AF-M predicitons.
  ☆11Updated 3 months ago
• graph-part / graph-part
  GraphPart, a data partitioning method for ML on biological sequences
  ☆28Updated last year
• jurgjn / af-protein-universe
  Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…
  ☆26Updated last year
• UCLOrengoGroup / cath-alphaflow
  ☆22Updated 2 months ago
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆30Updated last year
• TattaBio / OMG
  ☆43Updated 11 months ago
• Bitbol-Lab / Phylogeny-MSA-Transformer
  Supporting repository for "Protein language models trained on multiple sequence alignments learn phylogenetic relationships" (https://www…
  ☆17Updated 6 months ago
• steineggerlab / colabfold-protocol
  ColabFold protocol
  ☆52Updated 9 months ago
• clairemcwhite / vcmsa
  ☆30Updated last year
• TurtleTools / caretta
  A software-suite to perform multiple protein structure alignment and structure feature extraction.
  ☆30Updated last year
• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆46Updated 3 years ago
• Llannelongue / B4PPI
  Benchmarking Pipeline for Prediction of Protein-Protein Interactions
  ☆13Updated 3 years ago
• refresh-bio / protestar
  Protein Structure Archiver
  ☆12Updated last year
• biomed-AI / GPSite
  Geometry-aware protein binding site predictor
  ☆20Updated 11 months ago
• kWeissenow / MutAmore
  Rendering protein mutation movies from predicted 3D structures
  ☆20Updated last year
• songlab-cal / CPT
  Cross-protein transfer learning for variant effect prediction
  ☆20Updated last year
• idptools / sparrow
  Next generation sequence parameter library for proteins
  ☆34Updated 2 weeks ago
• PDB-REDO / AlphaBridge
  ☆37Updated 3 weeks ago
• MIDIfactory / AlphaFastPPi
  Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening
  ☆39Updated 10 months ago
• TattaBio / gLM2
  ☆70Updated 10 months ago
• JudeWells / chainsaw
  ☆43Updated 10 months ago
• BioColLab / PFresGO
  ☆21Updated last year
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆90Updated last year
• Doudna-lab / GARNET_DL
  ☆36Updated 6 months ago