kamimrcht / ELECTORLinks
ELECTOR: EvaLuator of Error Correction Tools for lOng Reads
☆15Updated 4 years ago
Alternatives and similar repositories for ELECTOR
Users that are interested in ELECTOR are comparing it to the libraries listed below
Sorting:
- A k-mer search engine for all Sequence Read Archive public accessions☆35Updated last year
- ☆20Updated last year
- Classify sequencing reads using MinHash.☆48Updated 5 years ago
- base-accurate DNA sequence alignments using edlib and mashmap2☆32Updated 4 years ago
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated 6 months ago
- URMAP ultra-fast read mapper☆38Updated 5 years ago
- Code to create a PRG from a Multiple Sequence Alignment file☆25Updated last month
- Scaffolding with assembly likelihood optimization☆21Updated 4 years ago
- ☆32Updated 2 years ago
- Strain-level abundances estimation in metagenomic samples using variation graphs☆24Updated 2 years ago
- transposable element typing pipeline☆19Updated last year
- Find Unique genomic Regions☆30Updated 2 weeks ago
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆35Updated 4 months ago
- De novo VIral Genome Annotator☆23Updated last year
- Assembler for raw de novo genome assembly of long uncorrected reads.☆36Updated 5 years ago
- SAMsift: advanced filtering and tagging of SAM/BAM alignments using Python expressions.☆23Updated last month
- ☆15Updated 5 years ago
- Haplotype-aware genome assembly toolkit☆30Updated 5 years ago
- Preprocessing paired-end reads produced with experiment-specific protocols☆32Updated 7 years ago
- fastq quality assessment and filtering tool☆18Updated 2 years ago
- Variant call verification☆16Updated 5 months ago
- Extracts subgraphs or components from a graph in GFA format☆25Updated 11 months ago
- kASA - k-Mer Analysis of Sequences based on Amino acid-like encoding☆23Updated 2 years ago
- Better Alignments with Translated HMMER☆23Updated 3 weeks ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- extract MSAs from genome variation graphs☆33Updated 5 years ago
- Improved Phased Assembler☆28Updated 3 years ago
- PGR-TK: Pangenome Research Tool Kit☆20Updated 7 months ago
- This is a library C/Python/CLI for working with TAF (.taf,.taf.gz) and MAF (.maf) alignment files☆29Updated 2 months ago
- Fast in-silico normalization algorithm for NGS data☆23Updated 4 years ago