fabilab / northstarLinks
Single cell type annotation guided by cell atlases, with freedom to be queer
☆25Updated 3 years ago
Alternatives and similar repositories for northstar
Users that are interested in northstar are comparing it to the libraries listed below
Sorting:
- Harmony framework for connecting scRNA-seq data from discrete time points☆53Updated 2 months ago
- ☆37Updated last week
- Inferring gene co-expression networks from single cell gene expression data☆28Updated 3 years ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆39Updated 7 years ago
- ☆44Updated last year
- kallisto index tag extractor☆20Updated 6 years ago
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- COMET Single-Cell Marker Detection tool☆32Updated 3 years ago
- ☆20Updated 8 years ago
- Single cell interactive plotting tools☆24Updated 5 years ago
- Single-cell Scalable Visualization and Analytics☆26Updated 6 years ago
- post-clustering differential expression test☆36Updated 6 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated 2 years ago
- Full annotation using shape-constrained trees☆28Updated 2 years ago
- metadata and data from the database☆41Updated 6 years ago
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 4 years ago
- Reconstruct the lineage topology of a scRNA-seq differentiation dataset.☆18Updated 5 years ago
- Explore and download data from the recount3 project☆37Updated 4 months ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- scAR (single-cell Ambient Remover) is a deep learning model for removal of the ambient signals in droplet-based single cell omics☆57Updated last year
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 6 years ago
- TCR Reconstruction Algorithm for Paired-End Single cell☆14Updated 6 years ago
- Explore the cancer relevance of your gene list☆52Updated last month
- Comprehensive pipeline for donor demultiplexing in single cell☆24Updated this week
- Signac☆26Updated 2 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- scRNAseq integration with triplet neural networks☆41Updated last week
- ARCHS4 RNA-seq processing scripts and web server pages.☆62Updated 5 years ago
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Updated 4 years ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆38Updated last week