KnowEnG / SequencEnGLinks
An interactive learning resource for next-generation sequencing (NGS) techniques
☆29Updated 6 years ago
Alternatives and similar repositories for SequencEnG
Users that are interested in SequencEnG are comparing it to the libraries listed below
Sorting:
- JAMM Peak Finder for Sequencing Datasets☆29Updated 5 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆36Updated last year
- Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.☆23Updated 6 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- A small R package to make sequencing read coverage plots in R.☆39Updated 3 years ago
- The Read Origin Protocol (ROP) is a computational protocol that aims to discover the source of all reads, including those originating fro…☆36Updated last year
- Expectation-Maximization algorithm for Allele-Specific Expression☆21Updated 2 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated last year
- ☆33Updated 3 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated 4 months ago
- Genomic data interpretation and visualization Workshop☆21Updated last month
- Sashimi plots for RNA-seq data using detected transcripts☆29Updated 5 months ago
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Updated 3 years ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data☆29Updated 3 years ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆38Updated last year
- Calculate and plot distributions of genomic ranges☆26Updated 4 months ago
- ChIP-seq DC and QC Pipeline☆36Updated 4 years ago
- interactive plots for differential expression analysis☆34Updated 2 months ago
- Isoform-level functional RNA-Seq analysis 🧬☆25Updated 3 months ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated 2 years ago
- Assembly of RNA reads to determine the effect of a cancer mutation on protein sequence☆25Updated 11 months ago
- gnomAD browser pre-ASHG 2018☆33Updated 4 years ago
- Useful tools for working with Salmon output☆38Updated 5 years ago
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆31Updated 7 years ago
- Differential ATAC-seq toolkit☆27Updated last year
- Comprehensive Human Expressed SequenceS☆18Updated 2 months ago
- Prepare Sailfish and Salmon output for downstream analysis☆42Updated 6 years ago