Alternatives and similar repositories for gene_features

Users that are interested in gene_features are comparing it to the libraries listed below

• FinucaneLab / pops
  ☆82Updated last month
• mikelove / mrlocus
  Older repo for MRLocus. See new website for software usage guide:
  ☆15Updated 2 years ago
• MalteThodberg / awesome-multitrait-gwas
  List of software packages for multi-trait / multiple-trait / multivariate / high-dimensional GWAS
  ☆31Updated 4 months ago
• sb452 / mr-code
  Code for implementing Mendelian randomization investigations
  ☆18Updated 9 years ago
• douglasyao / mesc
  Mediated Expression Score Regression (MESC)
  ☆26Updated 3 years ago
• natsuhiko / PHM
  Pairwise Hierarchical Model
  ☆19Updated 3 years ago
• dcalderon / rolypoly
  Method for identifying trait-relevant gene annotations from GWAS summary statistics.
  ☆18Updated 3 years ago
• kkdey / GSSG
  Gene Set + S2G strategy annotations analyzed for disease architecture
  ☆54Updated 2 years ago
• karltayeb / cafeh
  ☆13Updated 2 years ago
• clagiamba / moloc
  ☆36Updated 4 years ago
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆52Updated 2 months ago
• eQTL-Catalogue / eQTL-Catalogue-resources
  ☆48Updated 3 months ago
• opentargets / genetics-colocalisation
  Colocalisation pipeline for Open Targets Genetics
  ☆17Updated 3 years ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆46Updated last year
• huwenboshi / s-ldxr
  Stratified squared trans-ethnic genetic correlation
  ☆14Updated 3 years ago
• xqwen / dap
  software package for integrative genetic association analysis
  ☆35Updated 2 years ago
• huwenboshi / hess
  Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.
  ☆41Updated 7 years ago
• immunogenomics / IMPACT
  Code for creating cell-type-specific regulatory element annotation files
  ☆18Updated last year
• Marijn-Schipper / FLAMES
  FLAMES: Accurate gene prioritization in GWAS loci
  ☆41Updated 5 months ago
• caleblareau / gchromVAR
  Cell type specific enrichments using finemapped variants and quantitative epigenetic data
  ☆45Updated last year
• thewonlab / H-MAGMA
  ☆35Updated 2 years ago
• MRC-Epid / pGWAS_discovery
  Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"
  ☆24Updated 3 years ago
• opentargets / genetics-gold-standards
  GWAS gold standards repository
  ☆38Updated last year
• xinhe-lab / ctwas
  causal TWAS (cTWAS)
  ☆45Updated last week
• StatFunGen / pecotmr
  Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.
  ☆28Updated last week
• ZikunY / CARMA
  GWAS genetics Fine-mapping method
  ☆25Updated 10 months ago
• boxiangliu / locuscompare
  LocusCompare is an interactive visualization tool for comparing two genetic association datasets.
  ☆21Updated 2 years ago
• single-cell-genetics / limix_qtl
  ☆20Updated last month
• mancusolab / ma-focus
  MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets
  ☆34Updated last year
• karthikj89 / scgenetics
  identifying disease critical cell types and programs from single cell RNAseq
  ☆57Updated 3 years ago