datarail / gr_metricsLinks
☆15Updated 2 years ago
Alternatives and similar repositories for gr_metrics
Users that are interested in gr_metrics are comparing it to the libraries listed below
Sorting:
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- ☆12Updated 6 years ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- Explore the cancer relevance of your gene list☆51Updated 3 months ago
- ☆17Updated last year
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆13Updated this week
- Deconvolution of seed effects from gene effects in large scale RNAi screens☆11Updated 7 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- Single cell interactive plotting tools☆23Updated 5 years ago
- GEMINI: A variational Bayesian approach to identify genetic interactions from combinatorial CRISPR screens☆16Updated 2 years ago
- TFregulomeR reveals transcription factors’ context-specific features and functions☆16Updated 3 years ago
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆18Updated 2 months ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆26Updated last year
- A method to rapidly assess cell type identity using both functional and random gene sets☆13Updated 6 years ago
- Pipeline for the identification of cancer-related mutations from RNA-seq data☆13Updated 3 years ago
- R Shiny application for cross omics data analysis. In revision with Bioinformatics Adv.☆30Updated 2 weeks ago
- 🐶 hlabud: HLA genotype analysis in R☆16Updated 2 months ago
- An R package to increase interpretability of genes and SNPs (eg identified from GWAS and eQTL mapping)☆10Updated 2 years ago
- Differential Mutation Analysis☆11Updated 5 years ago
- MuSiCa - Mutational Signatures in Cancer☆23Updated last year
- Building the constrained coding regions (CCR) model☆16Updated 6 years ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆10Updated last year
- kallisto index tag extractor☆20Updated 5 years ago
- Mean Alterations Using Discrete Expression☆14Updated last year
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆28Updated last year
- Tutorial for the analysis of scRNA-seq data in R☆18Updated 6 years ago
- Genomic trajectories (pseudotimes) in the presence of heterogenous environmental and genetic backgrounds☆10Updated 6 years ago
- A Python package for gene network analysis☆32Updated 3 years ago
- Alignment and antibody assembly pipelines for Croote et al. (Science, 2018)☆10Updated 3 years ago
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening☆24Updated 10 months ago