☆11Sep 7, 2023Updated 2 years ago
Alternatives and similar repositories for microphaser
Users that are interested in microphaser are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Snakemake workflow for neoantigen prediction☆15Sep 7, 2023Updated 2 years ago
- Coronavirus (SARS-Cov-2) sequencing analysis☆10Oct 5, 2021Updated 4 years ago
- R package to analyze aberrant splicing junctions in tumor samples to identify neoepitopes☆15Jun 10, 2026Updated 2 months ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆69Jul 10, 2026Updated 3 weeks ago
- Hidden Markov Model based Copy number caller☆20Jul 18, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆13Aug 14, 2020Updated 5 years ago
- Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors☆34Jan 27, 2026Updated 6 months ago
- Somatic (mosaic) SNV caller for 10X Genomics data using random forest classification and feature-based filters☆23Apr 1, 2019Updated 7 years ago
- Nextflow pipeline for Mutect2 somatic variant calling best practices☆23Jun 14, 2024Updated 2 years ago
- CALDER (Cancer Analysis of Longitudinal Data through Evolutionary Reconstruction) reconstructs evolutionary trees from longitudinal bulk …☆15Nov 28, 2023Updated 2 years ago
- A novel PSSM based software for predicting class I peptide-HLA binding affinity☆16Feb 24, 2017Updated 9 years ago
- Torrent Mapping Alignment Program☆20Mar 2, 2013Updated 13 years ago
- Fork from https://bitbucket.org/mcgranahanlab/lohhla/src, modified for MSKCC needs☆32Jul 27, 2023Updated 3 years ago
- Snakemake with pytest example☆11Jul 18, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A computational workflow for exitron splicing identification☆16Jul 17, 2026Updated 3 weeks ago
- ☆13Sep 24, 2025Updated 10 months ago
- Samwell: a python package for using genomic files... well☆20Jun 28, 2022Updated 4 years ago
- 🐶 hlabud: HLA genotype analysis in R☆19Apr 11, 2025Updated last year
- Single Cell Consensus Clustering with Speed☆24Dec 12, 2022Updated 3 years ago
- Somatic point mutation caller☆17Jul 8, 2016Updated 10 years ago
- Python language bindings for bwa☆12Jul 19, 2026Updated 3 weeks ago
- Generate beautiful API documentation for Nextflow pipelines☆18Updated this week
- Nextflow plugin implementation skeleton☆11Sep 1, 2025Updated 11 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆16Aug 11, 2025Updated 11 months ago
- Toolkit for benchmarking fusion transcript predictions☆19Dec 24, 2025Updated 7 months ago
- program for haplotype phasing from sequence reads and related tools☆25Nov 29, 2018Updated 7 years ago
- A comprehensive analysis tool for Ribo-seq and small RNA-seq data☆10Jun 22, 2020Updated 6 years ago
- Singular Genomics Demultiplexing Tool☆16Mar 5, 2024Updated 2 years ago
- A framework to infer mutational signatures in cancer over time☆58Jul 9, 2019Updated 7 years ago
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆26Feb 8, 2022Updated 4 years ago
- Quality of life improvements for Bioinformatics in Python.☆35Jul 29, 2026Updated last week
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Sep 13, 2023Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- DRAGEN Tumor/Normal workflow post-processing☆24Sep 18, 2023Updated 2 years ago
- Clonality inference in multiple tumor samples using phylogeny☆14Sep 12, 2017Updated 8 years ago
- PRedictor of IMmunogenic Epitopes☆34Sep 24, 2025Updated 10 months ago
- Matplotlib Backend for Altair Visualization Library☆17Dec 2, 2020Updated 5 years ago
- This has been archived and active development transferred to gitlab.com/genomicsengland/gelreportmodels/GelReportModels☆14May 14, 2021Updated 5 years ago
- SCIPAC (Single- Cell and bulk data-based Identifier for Phenotype Associated Cells) is a computational method that identifies cells in si…☆16Jun 30, 2024Updated 2 years ago
- ☆20Sep 28, 2019Updated 6 years ago