Bioconductor / bioc-run
Helper script for bioconductor/bioconductor_docker
☆11Updated 3 weeks ago
Alternatives and similar repositories for bioc-run:
Users that are interested in bioc-run are comparing it to the libraries listed below
- Computable build reports, package metadata, and download stats from the Bioconductor project☆21Updated last month
- Develop and host GitHub actions for Bioconductor☆11Updated 3 years ago
- ☆11Updated 6 years ago
- A Grammar of Data Manipulation for Omics Data☆21Updated 4 years ago
- BioC2020: Where Software and Biology Connect☆12Updated 2 years ago
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆20Updated last month
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Updated 4 years ago
- the manifesto, workshops and tutorials of the tidy transcriptomics☆12Updated 10 months ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated last month
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆21Updated 4 years ago
- This python package is for transitioning bioconductor from SVN to git☆14Updated 2 years ago
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Updated 7 years ago
- TOP results by CONfident efFECT Sizes.☆14Updated 4 months ago
- Foundation of vector-like and list-like containers in Bioconductor☆17Updated 2 months ago
- R interface to 'Gos'☆38Updated 2 years ago
- integrative pathway analysis with modern PCA methodology and gene selection☆11Updated last year
- Explore design matrices interactively with R/Shiny☆37Updated 3 months ago
- Take command of your set enrichment analyses.☆21Updated this week
- R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases☆22Updated 4 months ago
- R interface to megadepth: BigWig and BAM related utilities☆12Updated 3 months ago
- ☆19Updated last year
- Demonstration of the use of an R package to organize a data analysis project☆21Updated 5 years ago
- Template for building a bioconductor workshop package using github actions☆20Updated 9 months ago
- A port of the matrixStats API to work with DelayedMatrix objects from the DelayedArray package☆16Updated 3 months ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 7 years ago
- An R interface to query and extract data from the ARCHS4 data☆10Updated 6 years ago
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Updated 3 years ago
- Repel Visually Similar Colors for Colorblind Users (CRAN)☆10Updated 2 months ago
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆25Updated 2 years ago
- An R package for multi-dimensional pathway enrichment analysis☆16Updated last week