SimoneTiberi / distinctLinks
distinct: a method for differential analyses via hierarchical permutation tests
☆11Updated 2 years ago
Alternatives and similar repositories for distinct
Users that are interested in distinct are comparing it to the libraries listed below
Sorting:
- Flexible, probablistic metrics for quality control of scRNA-seq data☆21Updated 2 years ago
- An R package for multi-dimensional pathway enrichment analysis☆16Updated 7 months ago
- Calculation of distance metrics for matrices☆26Updated 6 years ago
- R package for benchmarking single cell analysis methods☆32Updated 2 years ago
- Single-cell analysis with non-negative matrix factorization☆45Updated 4 months ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆22Updated 2 years ago
- An R package to analyze single-cell V(D)J data☆28Updated 2 years ago
- Trans-association between HLA and TCR-CDR3☆19Updated 2 years ago
- Wrapper and helper functions to use bulk RNA-seq differential expression methods with single-cell data☆21Updated last year
- Perform differential expression analysis on multi-sample single cell datasets using linear mixed models☆27Updated last month
- R vignettes for processing BUS format single-cell RNA-seq files☆21Updated 5 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆40Updated 4 years ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- Extension of SpatialExperiment with sf☆56Updated this week
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆38Updated 3 years ago
- Gene-level general linear mixed model☆23Updated 2 months ago
- An r package that works as a wrapper to homologene☆47Updated 2 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- An R package for visualising cell-cell interactions☆43Updated last year
- Variance stabilizing transformation for Gamma Poisson distributed data☆22Updated 2 years ago
- An analytics package for single cell data☆22Updated 3 years ago
- Collection of useful methods for single cell analysis☆14Updated last year
- Single-cell RNA Processing Software☆11Updated 5 months ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- ☆12Updated last year
- ☆14Updated 6 years ago
- sharing interactive single cell gene expression visualizations from Seurat☆11Updated 2 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 2 months ago
- Toolkit for Single-Cell Velocity☆58Updated 5 months ago
- R package for gene selection using k-NN graphs.☆13Updated 2 years ago