jessemzhang / dendrosplitLinks
☆24Updated 7 years ago
Alternatives and similar repositories for dendrosplit
Users that are interested in dendrosplit are comparing it to the libraries listed below
Sorting:
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆23Updated 5 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated last year
- ChIP-seq DC and QC Pipeline☆35Updated 4 years ago
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆26Updated 8 years ago
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Updated 3 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- JAMM Peak Finder for Sequencing Datasets☆29Updated 5 years ago
- Differential ATAC-seq toolkit☆27Updated last year
- Transcript quantification import with automatic metadata detection☆68Updated last month
- Preprocessing of single-cell RNA-Seq (deprecated)☆62Updated 6 years ago
- Haystack: Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆47Updated 3 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆32Updated 4 years ago
- R/Bioconductor package to interactively explore single cell clusters at multiple resolutions☆10Updated 3 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated last year
- R package for reading in & working with NucleoATAC outputs☆26Updated 6 years ago
- processes GoT amplicon data and generates a table of metrics☆31Updated 3 years ago
- ☆55Updated 5 months ago
- Methods for summarizing and visualizing multi-biosample functional genomic annotations☆46Updated 4 months ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆29Updated 4 years ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆37Updated last year
- Tutorials covering various topics in genomic data analysis.☆17Updated 6 years ago
- Annotation of genomic regions using transcription factor binding sites and epigenetic data☆40Updated 3 years ago
- Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each alle…☆45Updated 2 years ago
- Single cell RNA Seq data analysis with quantitative phenotypes☆13Updated 4 years ago
- Single Cell Analysis course at Cold Spring Harbor Laboratory 2017☆23Updated 7 years ago
- Ritornello is a high fidelity control free ChIP-seq peak calling algorithm☆13Updated 6 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated 10 months ago
- Clustering cells from single cell RNA seq assays☆46Updated 6 years ago
- Scripts to run and benchmark scRNA-seq cell cluster labeling methods☆48Updated 5 years ago
- A tool for fast and accurate summarizing of variant calling format (VCF) files☆61Updated 2 years ago