cole-trapnell-lab / ScribeLinks
Regulatory networks with Direct Information
☆17Updated 6 years ago
Alternatives and similar repositories for Scribe
Users that are interested in Scribe are comparing it to the libraries listed below
Sorting:
- Inferring cell-cell interactions from pseudotime ordering of scRNA-Seq data☆25Updated 3 years ago
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆24Updated last year
- Reconstruct the lineage topology of a scRNA-seq differentiation dataset.☆18Updated 5 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- Dynamic models for single-cell RNA-seq time series.☆40Updated 7 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 3 years ago
- Landscape Single Cell Entropy☆21Updated 5 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated last year
- Single-cell Case Control Analysis☆52Updated 3 weeks ago
- Information-based dimensionality reduction☆29Updated last year
- SOMatic is a tool for building Self-Organizing Maps and linking multiple maps.☆14Updated last year
- Harmony framework for connecting scRNA-seq data from discrete time points☆53Updated last month
- ☆29Updated 2 years ago
- ☆39Updated 4 years ago
- ☆28Updated 6 years ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆22Updated last year
- Single-cell Orientation Tracing☆21Updated 3 years ago
- Marker Selection by matching manifolds and elastic net☆23Updated last year
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆21Updated 2 years ago
- ☆37Updated 10 months ago
- ☆30Updated 3 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Updated 10 months ago
- Analyzing chromatin accessibility data in R☆18Updated 2 years ago
- Quasilinear data representations for single-cell omics data analysis☆43Updated 2 years ago
- ScoMAP is an R package to spatially integrate single-cell omics data into virtual cells and infer enhancer-to-gene relationships.☆28Updated 4 years ago
- ☆25Updated 2 years ago
- R package for transfer learning of single-cell RNA-seq denoising☆30Updated 3 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated 4 months ago