The software of Pamona, a partial manifold alignment algorithm.
☆22Mar 21, 2021Updated 5 years ago
Alternatives and similar repositories for Pamona
Users that are interested in Pamona are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The Software of UnionCom Algorithm☆25Jul 29, 2024Updated last year
- Code for Universal Single-Cell Matching with Unpaired Feature Sets☆22Jun 7, 2021Updated 4 years ago
- Gromov-Wasserstein based optimal transport for aligning single-cell multi-omics data☆80Jan 25, 2024Updated 2 years ago
- Multigrate: multiomic data integration for single-cell genomics☆33Updated this week
- ESICCC: A systematic computational framework for evaluation, selection and integration of cell-cell communication inference methods☆13Jan 10, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆12Apr 3, 2023Updated 3 years ago
- Computational framework for dataset integration☆11Jul 21, 2023Updated 2 years ago
- ☆21Jun 17, 2024Updated last year
- ☆14Jul 17, 2023Updated 2 years ago
- ☆14Jan 25, 2023Updated 3 years ago
- Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and…☆41Aug 23, 2023Updated 2 years ago
- SMILE: Mutual Information Learning for Integration of Single Cell Omics Data☆11Mar 28, 2023Updated 3 years ago
- Analysis repository for "Droplet-based combinatorial indexing for massive scale single-cell epigenomics"☆11Sep 30, 2019Updated 6 years ago
- MATCHER (Manifold Alignment to Characterize Experimental Relationships) is an approach for integrating single cell transcriptomic and epi…☆23Jun 16, 2017Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Single Cell Multi-omics deep clustering☆30Jul 1, 2025Updated 10 months ago
- Simulating Sequence Evolution☆11Jul 9, 2024Updated last year
- SCRIP(Single Cell Regulatory network Inference using ChIP-seq) is a tool for evaluating the binding enrichment of specific TR at single-c…☆20Jul 2, 2024Updated last year
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆39Nov 16, 2021Updated 4 years ago
- GIANT (Gene-based data Integration and ANalysis Technique) is a method for large-scale joint analyses of atlas-level single cell data.☆14Jun 13, 2023Updated 2 years ago
- Detect key Units in mosaic Tandem Repeats from representative reads from the same locus☆10Aug 2, 2023Updated 2 years ago
- ☆10Mar 11, 2025Updated last year
- ☆35Apr 15, 2025Updated last year
- A robust PCA method of tumor clone and evolution inference from single-cell sequencing data.☆12May 28, 2020Updated 6 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Single-Cell Sequencing Quality Control and Processing Software☆16Mar 26, 2022Updated 4 years ago
- A pipeline for Smooth-seq data analysis.☆10Sep 23, 2021Updated 4 years ago
- ☆11Feb 18, 2019Updated 7 years ago
- a unified single-cell data integration framework by optimal transport☆37Oct 1, 2024Updated last year
- IntegrateNet: A Deep learning Network for maize Stand Counting from UAV Imagery by Integrating Density and Local Count Maps.☆12Apr 15, 2022Updated 4 years ago
- A probabilistic factor model for spatial transcriptomics data with subcellular resolution☆25May 3, 2023Updated 3 years ago
- A single-cell RNAseq differential expression analysis approach in case-control study☆10Mar 6, 2022Updated 4 years ago
- DNAscan2 is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring v…☆14May 7, 2024Updated 2 years ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆12Oct 23, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- R package for metabolic enzyme enrichment anaylsis☆13Oct 24, 2025Updated 7 months ago
- Spatial Single Cell transcriptomic library☆19Jan 15, 2026Updated 4 months ago
- A versatile method for systematic identification of differential RNA splicing across platforms☆16Mar 31, 2026Updated last month
- The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…☆15Feb 27, 2019Updated 7 years ago
- A toolkit for automated local phylogenomic analyses, or ALPHA☆12Oct 23, 2019Updated 6 years ago
- ☆11Sep 7, 2023Updated 2 years ago
- ☆15Aug 9, 2023Updated 2 years ago