xqwen / ptwas
☆17Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for ptwas
- Total and allele specific read based cis-QTL, fine-mapping, and prediction☆9Updated 3 years ago
- Fine-mapping method only using summary statistics☆16Updated 8 years ago
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Updated 5 years ago
- Stratified squared trans-ethnic genetic correlation☆12Updated 2 years ago
- Older repo for MRLocus. See new website for software usage guide:☆15Updated last year
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆13Updated last year
- Create LocusZoom-style plots in R.☆20Updated last year
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 4 years ago
- Scripts used for generating Neale Lab UKB results☆18Updated 2 years ago
- Primo☆16Updated 3 years ago
- Estimate genetic correlation using predicted expression☆20Updated 6 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆17Updated 2 years ago
- Tissue of ACTion scores for Investigating Complex trait-Associated Loci☆13Updated 3 years ago
- Heritability, genetic correlation and functional enrichment estimation for case-control studies☆18Updated 11 months ago
- An R package for generating comparative regional association plots☆18Updated this week
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Updated 4 years ago
- Multi-Omic Strategies for TWAS☆12Updated last year
- Software to infer latent pleiotropic components from GWAS summary data☆12Updated last month
- Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis☆16Updated 2 weeks ago
- ☆10Updated last year
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆23Updated last year
- genetic correlation between phenotypes in the UK biobank☆13Updated 9 months ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated 5 months ago
- ☆20Updated 2 weeks ago
- haploR: utilities for mining Haploreg and other similar web-based tools☆9Updated 7 months ago
- software package for integrative genetic association analysis☆33Updated last year
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆11Updated 5 years ago
- ☆32Updated last year
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆18Updated 2 years ago
- Identify Intra-, Inter-donor variations in bulk or single cell longitudinal dataset☆17Updated last year