Tuteja-Lab / TissueEnrichLinks
R package for tissue-specific gene enrichment
☆14Updated 3 years ago
Alternatives and similar repositories for TissueEnrich
Users that are interested in TissueEnrich are comparing it to the libraries listed below
Sorting:
- Pan cancer summary statistics from meta analyses of UK Biobank and Kaiser GERA cohorts.☆16Updated 5 years ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆26Updated 2 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆32Updated 3 years ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 4 years ago
- ☆13Updated 7 years ago
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1☆18Updated 5 years ago
- Kidney Epigenome and Transcriptome-based multi-stage Prioritization☆17Updated 2 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Updated 2 years ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆28Updated last week
- Create Regional Association Plots☆12Updated last year
- ☆11Updated 5 years ago
- ☆18Updated 7 years ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Updated 3 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- This is the repository accompanying the pre-print titled, "Genome-wide analyses of 200,453 individuals yield new insights into the causes…☆13Updated 3 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆36Updated 4 months ago
- Analysis and visualization of RNA-Seq results☆30Updated 3 months ago
- GWAS genetics Fine-mapping method☆25Updated 10 months ago
- R package☆22Updated last year
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- Assessing enrichment of complex disease or trait associations among QTLs☆15Updated 5 years ago
- An R package for visualising cell-cell interactions☆44Updated last year
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 3 years ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Updated 2 years ago
- Pseudotime Analysis for Bulk Data☆16Updated last year
- sharing interactive single cell gene expression visualizations from Seurat☆10Updated 2 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Updated 4 months ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆33Updated 5 years ago
- GCAP (Gene-level Circular Amplicon Prediction) firstly implements extrachromosomal DNA detection from whole-exome-sequencing (WES) data a…☆20Updated last week
- R package for Flexible dot plots☆29Updated 3 years ago