π [Tutorial] RepSeq data mining basics in R
β10Mar 13, 2019Updated 7 years ago
Alternatives and similar repositories for repseq-annotation-tutorial
Users that are interested in repseq-annotation-tutorial are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Rep-Seq data analysis tutorialβ12Dec 6, 2017Updated 8 years ago
- Infer selection pressures on features of amino acid CDR3 sequences.β25Apr 17, 2024Updated 2 years ago
- An interactive browser for the VDJdb databaseβ16Oct 18, 2026Updated last week
- Trans-association between HLA and TCR-CDR3β20Mar 29, 2023Updated 3 years ago
- Reproducibility Repo for mvTCR paperβ14Apr 2, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Summary statistics for repertoiresβ18Feb 1, 2023Updated 3 years ago
- pygor3 repositoryβ10Nov 20, 2025Updated 11 months ago
- π [Paper/Tutorial] T-cell repertoire annotation and motif discoveryβ14Sep 15, 2025Updated last year
- β12Sep 20, 2019Updated 7 years ago
- Analysis code for the TAP-seq manuscript.β13Jun 25, 2021Updated 5 years ago
- A graduate-level elective course: Python Programming for Life Science Studentsβ10Mar 26, 2026Updated 7 months ago
- π§ Deep generative models for TCR sequences π§β17Apr 4, 2022Updated 4 years ago
- β19Nov 18, 2025Updated 11 months ago
- Contribution of systemic and somatic factors to clinical response and resistance in urothelial cancer: an exploratory multi-omic analysisβ24Oct 31, 2017Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer β’ AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Regulatory networks with Direct Information in pythonβ42Mar 9, 2023Updated 3 years ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq dataβ29Aug 9, 2022Updated 4 years ago
- Detecting TCR involved in immune responses from single RepSeq datasetsβ28Jun 17, 2019Updated 7 years ago
- Altered TCR Ligand Affinities and Structuresβ13Dec 1, 2023Updated 2 years ago
- Jupyter notebooks from our weekly (or so) hackathonsβ11Dec 3, 2024Updated last year
- A set of real-world RepSeq datasets used for testing the VDJtools softwareβ10Jul 8, 2016Updated 10 years ago
- β13Feb 16, 2019Updated 7 years ago
- Software for Ontogenic aNalysis of Antibody Repertoiresβ19Jun 30, 2026Updated 3 months ago
- Quantifiable predictive features define epitope-specific T cell receptor repertoiresβ13Dec 8, 2022Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available β’ AdRun AI, ML, and HPC workloads on powerful cloud GPUsβwithout limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- GIANT (Gene-based data Integration and ANalysis Technique) is a method for large-scale joint analyses of atlas-level single cell data.β14Jun 13, 2023Updated 3 years ago
- a tool for annotation of immunoglobulin genes in genome assembliesβ15Sep 22, 2025Updated last year
- Breast Cancer Single Cell Atlasβ12Mar 31, 2022Updated 4 years ago
- β25Jan 4, 2024Updated 2 years ago
- A collection of utilities for working with next generation (MPS) sequencing data in Groovyβ15Sep 25, 2026Updated last month
- π A lightweight immune repertoire browserβ28Dec 10, 2019Updated 6 years ago
- B-cell repertoire and clonal family tree explorerβ18Oct 19, 2026Updated last week
- FREE Divergence Error-Correcting DNA Barcodesβ10Jun 23, 2018Updated 8 years ago
- 2-D XY Model with Monte Carlo method to simulate the KT Phase Transitionβ17Dec 12, 2016Updated 9 years ago
- Managed Kubernetes at scale on DigitalOcean β’ AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Fast string distance computation in Pythonβ16Dec 21, 2022Updated 3 years ago
- Bayesian mixture models for estimating and clustering cancer cell fractionsβ26Dec 20, 2022Updated 3 years ago
- An UMI-tagged sequencing swiss-knife. Built for amplicon sequencing of immune repertoires, ctDNA and rare mutations, single-cell sequenciβ¦β45Updated this week
- IgSimulator is a versatile tool for simulation of immunoglobulin repertoireβ12Nov 25, 2016Updated 9 years ago
- represent each cell in UMAP plots as a pie chartβ16Sep 27, 2021Updated 5 years ago
- β22Apr 6, 2018Updated 8 years ago
- express course in ML to fell in love withβ11Dec 26, 2019Updated 6 years ago