antigenomics / repseq-annotation-tutorial
π [Tutorial] RepSeq data mining basics in R
β10Updated 6 years ago
Alternatives and similar repositories for repseq-annotation-tutorial:
Users that are interested in repseq-annotation-tutorial are comparing it to the libraries listed below
- Evaluation of the effect of quantification choices on RNA velocity estimatesβ27Updated 3 years ago
- Summary statistics for repertoiresβ16Updated 2 years ago
- β12Updated 10 months ago
- epigenome analysis to rank transcription factorsβ13Updated 5 years ago
- Single cell interactive plotting toolsβ23Updated 4 years ago
- Perturb-seq analysis packageβ14Updated 11 months ago
- Mean Alterations Using Discrete Expressionβ14Updated 11 months ago
- scoverβ23Updated last year
- Inferring gene co-expression networks from single cell gene expression dataβ24Updated 2 years ago
- University of Cambridge PhD thesisβ15Updated 4 years ago
- Reconstruct the lineage topology of a scRNA-seq differentiation dataset.β18Updated 4 years ago
- 𧬠π¦ A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.β¦β27Updated 3 years ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq dataβ29Updated 2 years ago
- Bioinformatics for Benched Biologistsβ22Updated 4 years ago
- BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq dataβ42Updated 6 months ago
- βοΈ Matching T-cell repertoire against a database of TCR antigen specificitiesβ38Updated 6 years ago
- Comparison of Adaptive Immune Receptor Repertoiresβ26Updated 2 months ago
- Algorithms for single-cell analysisβ29Updated 3 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlasβ25Updated last year
- This repository contains the code for reproducing all the results and figures from the preprint "Isoform specificity in the mouse primaryβ¦β16Updated 3 years ago
- β42Updated 5 months ago
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networksβ28Updated last month
- A portable, flexible, parallelized tool for complete processing of massively parallel reporter assay dataβ32Updated 2 months ago
- Identification of differentially methylated genes in biomedical dataβ14Updated 6 years ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.β28Updated 5 years ago
- Code associated with MIX-seq manuscriptβ14Updated 4 years ago
- Single-cell Scalable Visualization and Analyticsβ25Updated 6 years ago
- Inference of TCR motifsβ29Updated 2 weeks ago
- β17Updated 2 months ago
- Please consider using/contributing to https://github.com/nf-core/scdownstreamβ24Updated 9 months ago