Tools for building and manipulating graphs in Python
☆46Dec 18, 2025Updated 9 months ago
Alternatives and similar repositories for graphtools
Users that are interested in graphtools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Regulatory networks with Direct Information☆19Oct 14, 2019Updated 6 years ago
- Links to data science, bioinformatics, statistics, and machine learning resources☆18Aug 20, 2020Updated 6 years ago
- A collection of scripts and tools for loading, processing, and handling single cell data.☆77Sep 22, 2025Updated last year
- ☆38Dec 3, 2017Updated 8 years ago
- benchmark for single-cell RNA-seq imputation methods☆29Mar 16, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- PHATE (Potential of Heat-diffusion for Affinity-based Transition Embedding) is a tool for visualizing high dimensional data.☆559Mar 4, 2026Updated 7 months ago
- ☆17Jan 3, 2019Updated 7 years ago
- Code and webpages for our study on teaching humans to defer to an AI☆12Nov 6, 2023Updated 2 years ago
- Bootstrap imputation for scRNAseq data☆12Jul 18, 2020Updated 6 years ago
- Committee Meeting Reports - LaTeX☆11Jun 11, 2018Updated 8 years ago
- A package for downloading and uploading figshare data☆29May 22, 2023Updated 3 years ago
- Create PyTorch Datasets from AnnData☆21Jan 6, 2026Updated 9 months ago
- ☆15Jun 4, 2014Updated 12 years ago
- Breast Cancer Single Cell Atlas☆12Mar 31, 2022Updated 4 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Very concise example of integrated gradients (a method to reveal areas of attention in input images)☆10Jun 17, 2019Updated 7 years ago
- ☆22Aug 30, 2026Updated last month
- ☆23Feb 7, 2020Updated 6 years ago
- Original materials for the "Introduction to Solving Biological Problems with Python" 2 days course☆10Jun 25, 2018Updated 8 years ago
- Imputing Single-cell RNA-seq data by combining Graph Convolution and Autoencoder Neural Networks☆20Jun 21, 2024Updated 2 years ago
- A tool for automated uploading and version management of scientific data to Zenodo☆46Apr 13, 2026Updated 5 months ago
- Benchmarking computational doublet-detection methods for single-cell RNA sequencing data☆10Feb 25, 2021Updated 5 years ago
- Identification and targeting of treatment resistant progenitor populations in T-cell Acute Lymphoblastic Leukemia☆15May 16, 2024Updated 2 years ago
- Regulatory networks with Direct Information in python☆42Mar 9, 2023Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- deepSimDEF offers single- and multi-channel deep learning models for functional analysis of genes using Gene Ontology annotations of gene…☆13May 13, 2022Updated 4 years ago
- Spatial-Linked Alignment Tool☆95Dec 20, 2024Updated last year
- ☆18Apr 28, 2025Updated last year
- A 3-Dimensional View of Human Metabolism and Disease☆33Feb 28, 2018Updated 8 years ago
- End-to-end pipeline for segmenting cell nuclei on histology slides☆16Jul 19, 2022Updated 4 years ago
- ☆46May 17, 2022Updated 4 years ago
- Creating multi-resolution embeddings and clusters from high dimensional data☆58Sep 27, 2024Updated 2 years ago
- scRNA-seq data visualization from scrattch☆30Aug 20, 2025Updated last year
- GyroSPD: Vector-valued Distance and Gyrocalculus on the Space of Symmetric Positive Definite Matrices☆16Nov 8, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆16Jan 27, 2023Updated 3 years ago
- Raspberry pi code for controlling the rapid-deploy critical care ventilator☆15Feb 2, 2022Updated 4 years ago
- single cell RNA-seq analysis template based on online resources☆11Jul 1, 2018Updated 8 years ago
- DPPIN: A Biological Repository of Dynamic Protein-Protein Interaction Network Data, IEEE BigData 2022☆33Feb 13, 2023Updated 3 years ago
- Convergent Cross Mapping R package☆14Oct 6, 2013Updated 13 years ago
- Clustering through Imputation and Dimensionality Reduction☆64Sep 21, 2017Updated 9 years ago
- Source code and dataset for IJCAI 2022 paper "Rethinking the Setting of Semi-supervised Learning on Graphs"☆10May 31, 2022Updated 4 years ago