cddlab / alphafold3_toolsLinks
Toolkit for alphafold3 input and output files
☆83Updated 3 weeks ago
Alternatives and similar repositories for alphafold3_tools
Users that are interested in alphafold3_tools are comparing it to the libraries listed below
Sorting:
- Fast indexing and search of discontinuous motifs in protein structures☆73Updated last week
- Scripts to run AlphaFold3, Boltz-1 and Chai-1 with MMseqs2 MSAs and custom templates.☆85Updated last week
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆75Updated 4 months ago
- ☆51Updated 2 weeks ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆64Updated last month
- ☆86Updated 3 weeks ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆68Updated last year
- Protein folding in Pymol☆109Updated 7 months ago
- AlphaFold-initiated replica exchange protein docking☆84Updated 2 months ago
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆96Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆65Updated 9 months ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆58Updated 5 months ago
- Analysis of alphafold and colabfold results☆31Updated last month
- ☆42Updated 2 months ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆159Updated last month
- Efficient manipulation of protein structures in Python☆55Updated 9 months ago
- code for IDR binding paper 2025☆46Updated 6 months ago
- A command-line interface and Python library for generating AlphaFold3 input files.☆35Updated 2 months ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆62Updated last year
- Learning the language of protein-protein interactions☆89Updated this week
- ☆85Updated 11 months ago
- ☆74Updated 6 months ago
- Machine Learning models for in vitro enzyme kinetic parameter prediction☆53Updated 4 months ago
- Small_molecule_binder_design_use_pseudocycles☆20Updated 9 months ago
- ☆46Updated 7 months ago
- PLM based active learning model for protein engineering☆82Updated last year
- Code for ColabDock paper☆144Updated 3 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆41Updated 3 months ago
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆91Updated 2 months ago
- ☆193Updated 2 weeks ago